Pungitius pungitius (ninespine stickleback): 119229120
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Entry
119229120 CDS
T07626
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119229120 (ttf2)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119229120 (ttf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Zn_ribbon_GRF
ResIII
DEAD
KELK
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
119229120
NCBI-ProteinID:
XP_037345179
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MEKVLCNVHGSLCMLKTGVKDGPNKGKSFYVCVDKQGCDFTHVARISPSNCLQHEDSMVE
LQALTYSLQQQSHRLFYRCIVGKKAAQKWCGNVPWSAPEKEKRNPLSHAQPQPSCLPPVR
NPFKASGKTDSDSEWRRMQRGGGGGGGGEERGSGESHKAEGGGRPQKENVDGVAAGEQEA
ESYRGKRLPPGMKLKKRVSDEEEKCLKASSGGGPRDEKHGERVLVSESLPGPREDSPQQP
TERVKETGERDSDSRRNPPASTKAAQPEASRPAVHQVHGEGDDDDDLVVVSVTPAAQKAP
PASAVQKTLTAFAGFQPASKVKGQQQDPRGLQGLLTAQLQQKKATLLAVNVAALPDKGER
LKSQVKELQDALESLSLAAPSPPGSQGGGSGDGADLEVNPFGRRGGTILLPAPPAPGPSQ
QQDLQQSQSYTQAYGAGHQAFYGGRMTDDRLLAVKNATSETIDHLHKSLESCPDPEAEVP
DPKGIKVLLLAHQRRALAWLLWRENQNPCGGILADDMGLGKTLTIIALILAKKTKANKEV
EKKPQSWISKTDSSLVASTGTLIICPASLVHHWKREIERHVKTGKLTVYLYHGPQRERRA
ELLADFDVVVTTYSLVSKEVPAQKGGAESSSKDADEVPPRSAPLLRVAWARVVLDEAHNI
KNPKVQTSMAVCQLRARARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEYKVWKAQVDNGS
NRGRERLNILTRTLLLRRTKAQRDSEGKPLVSLPDRTCEVHRLELSRDEQAVYDVVFAQS
RSTLQNYLKRHEGSDRKGDASSSNPFDKVAQEFGVSQAASTSQQPQQASSTVHILSLLLR
LRQCCCHLSLLQKTLDTSELQGDGIVLSLEEQLNALSLSSGPSPGSDPPPPGTVALNGIR
FASRLFEDTSESTKIAAIVSELKAIRQKGADQKSVIVSQWTSMLRIVAVHLRGMGLRYAV
IDGTVAPKHRMDLVEEFNTNARGPQVMLVSLCAGGVGLNLIGGNHLFLIDMHWNPALEDQ
ACDRIYRVGQSKDVTIHRFVCDGTVEEKISTLQEKKKELAQNVLSGTGSTVSKLSLADLR
IIFGV
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggttttatgtaatgttcacggtagcttgtgcatgttaaaaaccggcgttaaa
gatggaccaaacaaaggcaaaagcttctacgtctgcgttgacaagcagggctgtgacttc
actcatgtggcacgaatttcaccatccaactgcctccagcacgaagactcgatggtggaa
ctccaagcgctcacctacagtctgcagcagcagagccacaggttgttctacaggtgcatt
gtgggtaaaaaagccgcccagaagtggtgtggaaacgttccgtggagtgcgcccgagaag
gagaagaggaaccctctgtcccacgcgcagccgcagccttcttgcctgccgcccgtccga
aaccccttcaaagcctccggcaagacggactcggactccgagtggaggaggatgcagcgg
ggcggcggcggcggcggcgggggggaggagagaggcagcggcgagagtcacaaggccgag
gggggagggaggcctcagaaagaaaacgtggatggcgtcgccgcgggggaacaggaggca
gagtcgtaccgaggcaaacggcttccgccgggaatgaagctgaagaaaagggtttcggat
gaggaggaaaagtgcctcaaagcgagcagtgggggggggccgagggacgagaagcacggc
gagcgggtcctcgtctccgagtccttgccgggtccccgcgaggactctcctcaacaaccg
accgaaagagtcaaggaaaccggagagagggactctgacagcagaaggaacccccccgca
tcgaccaaagcagcacaaccggaggccagccgccccgcggtccaccaggtccacggcgag
ggtgatgatgacgatgacctcgtggtggtgtcggtgacgccggcggctcagaaagcgccg
cccgcctctgccgttcagaagacgctgaccgccttcgccgggttccagccggcgtcgaag
gtcaaaggtcagcagcaggacccccgagggctgcagggcctgctcacggctcagctccag
cagaagaaggcgaccctgttggcggtgaatgtggcggctctgcccgacaaaggggagcgg
ctgaagtcccaggtgaaggagctgcaggacgctctggagtctctgagcctcgccgctcct
tctccgcccggctctcagggtggaggtagcggcgatggagccgatctggaggtcaacccc
ttcggccggcggggcggcaccatcctgctccccgcccccccggcaccgggcccctcccaa
cagcaggacctccagcagagtcagagttacacccaagcgtatggagccggccatcaggcc
ttctacgggggccggatgaccgacgaccgcctgctggccgtgaagaacgccaccagcgag
accatcgaccacctccacaagtccctggagtcctgccccgaccccgaggccgaggtcccg
gaccccaagggcatcaaggtgttgctgctggcccaccagaggagagcgttggcctggctg
ctctggagagagaaccagaacccctgcggaggaattctggcggatgacatgggcctgggg
aaaaccttgaccatcatcgctctcattctggccaagaagaccaaagctaacaaggaggtg
gagaagaagccgcagagctggatctcaaagaccgactccagcctggtggcttctacagga
accctgatcatctgccccgcctccctggtgcaccactggaagagggagatcgagagacac
gtgaagacgggcaagctcacggtctacctgtaccacggcccccaacgcgagagaagagcc
gaactgctggctgactttgatgtggtggtgaccacatacagtctggtctctaaggaggtc
ccggctcagaaggggggcgcggaaagctccagcaaagatgcggatgaagtgccgccccgc
tcggctcctctgctgcgggtcgcctgggcccgggtggtgctggacgaagcccacaacatc
aaaaaccccaaagtgcagacgtccatggccgtgtgccagctgagggcccgcgcccgctgg
gctgtcaccggcacgccaatccagaacaacctgctggacatgtactcgctgctcaagttc
ctgcgctgctccccgttcgacgagtacaaggtgtggaaagcccaggtggacaacggctcc
aaccggggccgcgagagactcaacatcctgaccaggacgctgctgctccgacggaccaag
gcccagcgcgactctgaggggaaaccgctggtgtctctccccgatcggacctgcgaggtg
catcgactcgaactgtcccgggacgagcaggctgtgtacgacgtggtctttgcccagtcc
aggtcgactctgcagaactacctgaagcgacacgaggggagcgacaggaaaggagacgct
tccagctcgaaccccttcgacaaagtggcgcaggagttcggtgtgtctcaggcggcctcg
acttctcagcagcctcagcaggcgtccagcaccgtccacatcctgtccctgctgctgcgc
ctccgtcagtgctgctgtcacctgtcgctcctccagaagactctggacacctccgagctg
cagggcgatggcatcgtcttgtctctggaggagcagctcaacgctctgtcgctctcctcg
ggcccgtcccccgggtcggaccctcccccccccggaaccgtggccctcaacggaatccgc
ttcgcctctcgtctgtttgaggacaccagcgagagcaccaagatcgccgctatcgtctcc
gagctgaaggcgatcaggcagaagggggcggatcagaaaagcgtcatcgtgtcccagtgg
accagcatgctcagaatcgtggcggttcacctgcgtgggatgggcctcaggtacgccgtc
atcgacgggaccgtcgcccccaaacaccggatggacctggtggaggagttcaacaccaac
gcccgcgggccgcaggtgatgctggtgtctctctgtgctggaggcgtcggcctgaacctc
atcggcgggaatcacctgtttctgatcgacatgcactggaaccccgccctggaggatcag
gcctgtgaccgtatctacagggtgggacagagtaaagacgtcaccatccacaggttcgtg
tgcgacggcacggtggaggagaagatctccaccctgcaggagaagaagaaggagctggcc
cagaacgtgctgtcgggaaccggaagcaccgtctccaaactgtcgctggccgacctcagg
atcattttcggtgtgtga
DBGET
integrated database retrieval system
