Pungitius pungitius (ninespine stickleback): 119229162
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Entry
119229162 CDS
T07626
Name
(RefSeq) polycystin-1-like protein 2
KO
K04988
polycystin 1L2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119229162
04091 Lectins [BR:
ppug04091
]
119229162
Ion channels [BR:
ppug04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119229162
Lectins [BR:
ppug04091
]
C-Type lectins
Others
119229162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
GPS
Motif
Other DBs
NCBI-GeneID:
119229162
NCBI-ProteinID:
XP_062420899
LinkDB
All DBs
Position
10:complement(18847845..18861980)
Genome browser
AA seq
1454 aa
AA seq
DB search
MEIHTAVSAILEGVCSILDICPNKDVCDAALLSMSNTQSALLAFKEVDKASIILRKPHFR
VFVNRVTLGNLHKEIINIPNSSSLTFSLPALSNIGPSDEPVDVRMLSLDTNPFSWNKRGN
ISGPIGALSLTREDGSIIPVENLSENIEILIPRPVGEKVETTVLDLGNYSTVIINISSDD
STLVLKMVPSNDPLPFKLYLGYMDYPTETNNVAMTEMPHQGETQEERYTWLLDPRDFKRY
RGKHYLVVRPIVGPGIKSINASLSITSFTTACKFWNESTSEWSTSGCRVGVQTTPLVIQC
LCNHLTFFGSSFFVAPNTVDLSQTAHLFGTFGENPVVVCFVGSLFLVYLLAIVWARRKDI
KDIVKVKVTVLEDNNPMDENRYLLSVSTGYRRGASTSSQVTITLMGAEGTSEPHHLTDPK
KRVFERGAVDVFLLTTPFSLGDLQGIRLWHNNSGSHPAWYVGNVVVHDIQTDQKWHFLCN
SWLAIGMGDGSVDLVVPVSTEMDLKRFSNLFYMKTTKDFSDGHLWYSVISRPPGSNFTCV
QRVSCCFTLLLCTMLTSIMFYGIPTDPSEQTMHFGHFEFTWQQFIVGVQSSLIMFPINIL
IVSIFRSTRARETSCCKRKTKKPDALGLNSFLQTVTTNTEVDVSLDTIIKDITRIACSLS
NNMKSNIQNMESGQGVDVNAVLSMVEDFIKPNKTTIDFTKHQMQSSSNLAQPQPPEGGPG
STMEGIQRKSSKTQYLYRQLCHIDKRLSLLGPSGFPTPHSYSRALQQIQGIKECLEDQLG
CINPDEITQNRLSPADSSDGGDGHRKRACCHRGLPWWFVFVGWLLVIACSFVSGFFTMLY
GLKFGKDRSVSWLVSMNVSFFQSVLVIQPLKVLCLAVFFALVIKKVENEDFQNVEFEGKT
GGYKELQMKRQNSSIYKPPPAADIEKMKRKKVMEQKAFALFKEILTYVVFMWMLLLLAHG
QKNPNVFFLHRHIRDSFSSKTSDTMSLADVFTWANTSLLSNLFGVYPGFITDGNSKLVGN
ARLRQLRVQGNSCQTAGPMLQVAPDCNALNSWEAEDMGSYDTGWNHSERVDTSTGTSSPW
TYQTQSELRSYPIWGQMVLYRGGGYVAELGPDSQNATSTLDYLFTNTWLDVHTRAIFVEF
TVYNANVNLFCIVTLLLETSAVGAFQFHSELHSVRLYQSSGNLHIFVIAAEIIHLLFILY
YMFLQGKLMKQQRWAYFRCKWNLLELTIILLSWSAVAVFIKRAVIGNRDMTYYENHKHQF
ASFYETATTDAVLQYLVAFLVLLATFKLWHLLRLNPKMNMITAALQRAGNDISSFLVVIL
IMFVAYSVSSNVIYGWKLSSYKTFMDALLTIISLQIGIFNYDEVLDGSPLLGGLLFGSCI
VLVTFVVLNLLLSVILVAFKRERLHHKPSEEEEIANLMLKNICGLFGIRYGDTSDVHRPE
AKQDRGHEQQQKYS
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcacactgcagtcagtgccattttggagggagtgtgcagtatcctggacatt
tgtcccaataaagacgtctgtgatgccgctttgctttctatgagcaatacacagagtgca
ctgttagcatttaaagaggtcgacaaagcgtcaatcatcctccgtaagcctcactttcgt
gtgtttgtcaatagagtgacactgggaaacttacataaagagattataaacattcccaac
agttccagcctcacattttctctcccagcactctccaatataggaccttcagacgaacca
gtggatgtacgaatgctgagtttagacacaaacccattttcctggaataaaagggggaac
atcagtggcccaataggtgctctctccctcaccagagaagatggttctataatccctgtg
gagaacttgagcgaaaacatagagattcttataccaagacctgtaggagagaaggtggaa
accactgttttggacctggggaactacagcacagtgatcataaacatttcttcagatgat
tctacgctggtattaaagatggtgccttcaaatgatcctttacccttcaaactgtacctt
ggttatatggactaccccactgaaacaaataatgttgcaatgacagagatgcctcaccag
ggagaaacacaagaggagagatacacttggctactggaccctagagatttcaagagatac
aggggaaaacactatcttgtagtgaggcccattgtaggtcccggtataaaatccatcaat
gcaagtttgtccatcacctccttcactaccgcctgtaaattctggaatgaatcaacgtcg
gagtggagcacttcaggatgcagggttggcgttcaaaccacacctctagtaatccagtgc
ctctgcaaccacctcaccttcttcgggagctcttttttcgtcgctcccaacactgtagac
ctgtcacaaaccgcgcatctgtttgggacttttggtgaaaaccctgtggttgtctgcttt
gtggggtccctctttttggtgtatcttttggcgattgtgtgggcacgacgaaaagacatt
aaagacatcgtgaaggtgaaggtaactgtcctggaggacaacaaccccatggacgagaac
cgctacctgttgagtgtcagcacagggtatcggagaggagcctccacttcctcacaggtg
acaatcactctgatgggtgcggagggaaccagtgaaccacatcacctgacggatccaaag
aaacgtgtgtttgagagaggcgcggtagatgtgttcctgctaactacacccttctccctg
ggagacctgcagggcatcagactgtggcacaacaactcaggaagccatcctgcctggtat
gttggcaatgttgtggttcatgatatacagacggatcagaaatggcattttctatgcaac
tcctggctggctataggcatgggggatggttctgtggatttagtcgttcctgtttctacg
gaaatggatttgaagagattcagtaacttgttctatatgaagaccacaaaggatttcagt
gatggacacctctggtactctgtgatcagtcgaccaccaggcagcaacttcacttgtgtt
cagagagtctcctgctgttttacactgctgctctgcaccatgctgaccagcatcatgttt
tatgggatcccaacggatccctcggagcagaccatgcacttcggtcactttgagtttacc
tggcagcagttcatcgtcggagttcagagttccctcatcatgtttcccataaacatccta
attgttagcatttttagaagcactcgcgcacgggagacgtcttgttgcaagcgcaaaacc
aaaaagcccgacgcccttggactgaattcgttcttacagactgtgaccaccaacacagag
gttgatgtttctttggataccatcatcaaggatatcacaagaattgcttgttctctgtct
aacaacatgaaaagcaacatacaaaacatggagtctggacaaggcgttgatgtcaatgct
gttctctccatggtggaggactttatcaaaccaaataaaaccaccattgacttcacaaag
caccaaatgcagagctctagcaacctcgctcagcctcagccaccagagggcggtccaggg
tctacaatggaggggattcaaaggaagagcagcaaaacccagtatctgtaccggcagttg
tgtcacatcgacaagcggctgagtctgttgggtccgtcgggcttcccgaccccgcacagt
tacagccgagctcttcaacagatccagggaatcaaggagtgtcttgaagatcagcttggt
tgtatcaacccagatgaaatcacccagaacaggttgagcccagcagacagcagcgatggt
ggtgatggtcacaggaagagggcgtgctgtcatcgagggctaccctggtggttcgtcttt
gtgggctggctgctagtgatcgcatgcagttttgtctctgggtttttcacgatgctttat
gggttgaaatttgggaaggatcgctctgtaagctggttggtgtccatgaacgtctccttt
ttccagagcgtgcttgtcattcagccattgaaggtgctctgtcttgctgtcttctttgct
cttgtgataaagaaagttgaaaatgaagatttccaaaatgtagagtttgaaggaaagaca
ggtggttataaggaactacaaatgaagagacagaattccagtatctataagcctcctcct
gctgcagacattgagaagatgaaaaggaaaaaggtcatggaacagaaagcctttgccctc
ttcaaagaaatattgacctacgtggtcttcatgtggatgttgctgctgctagcacacggc
cagaaaaatcccaatgtctttttcctgcatcgtcacatccgagatagcttcagtagcaaa
acctcagacaccatgagtcttgcagatgtgttcacttgggccaacacatctctactaagt
aacctttttggagtttatccaggattcatcactgatggaaactccaagcttgtaggtaat
gctcgtcttcgtcaactgagagtgcagggcaactcctgtcagactgcaggacctatgctc
caggttgcaccagactgtaacgctctgaattcttgggaggctgaggatatggggtcctat
gacaccggctggaaccactcggagagggttgatacctctacaggcacatctagcccgtgg
acataccagacgcagtctgagctcaggtcttatcccatctggggccaaatggtactctac
aggggaggtggctatgtagcggagctcggcccggattcacaaaatgccaccagcaccctc
gactacctgttcacgaatacatggctggatgtgcacacaagggcgatctttgttgagttc
accgtgtacaatgcgaacgtgaacctcttctgcatcgtcactctcctgctggagacaagt
gctgtgggagcttttcagttccacagcgagctgcacagcgttcggctttaccaatcaagt
ggtaatcttcacatcttcgtaatagctgctgagatcatacacctgcttttcatcctctat
tacatgttcctgcagggaaaactgatgaagcagcagcgctgggcttacttcaggtgcaag
tggaacctcctcgagctgactatcatcttactgagctggagtgccgtggctgtcttcatc
aagagggccgtgatcggaaaccgcgatatgacctactacgagaaccacaagcaccaattt
gcaagtttttacgagaccgccacaaccgacgcagtgctccagtatctggtggccttcctg
gtcctcctggcaaccttcaaactgtggcacctgcttcgactgaaccccaagatgaacatg
atcaccgccgccctgcagcgggccgggaacgacatatccagcttccttgtggtcatttta
atcatgtttgtggcgtattccgtttcgtccaacgtgatttacggctggaagttgtcctcg
tataaaacttttatggatgcattgctgaccatcatcagtttgcagataggtatctttaac
tatgacgaggtcctggacggctcccctttgctcggcggattactgtttggttcctgcatc
gttttagtcacgttcgtggtgctcaatctcttactctctgtgatcctggtggccttcaag
cgggagcgactacaccacaagccctcagaggaggaggagatagccaacctgatgctgaag
aacatctgcggtctcttcgggatcagatacggagacacaagtgacgtccacaggcctgaa
gcgaagcaggaccgtggccatgaacaacagcagaaatactcttaa
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integrated database retrieval system
