Pungitius pungitius (ninespine stickleback): 119229241
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Entry
119229241 CDS
T07626
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119229241 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119229241 (gtf2e1)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
119229241 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
119229241 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
DUF1272
Zn_ribbon_15
Motif
Other DBs
NCBI-GeneID:
119229241
NCBI-ProteinID:
XP_037345357
LinkDB
All DBs
Position
10:433464..441919
Genome browser
AA seq
442 aa
AA seq
DB search
MIEPEVLTEVPAALKRLAKQVVRGFFGVEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKADKFVKCRMRVETAPDGKTTRHNYYFINYRVLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDASVCPDGRTLVARFNE
QIEPIYALLRETEDVNLSQDLLEPEPAEIPALKQSRDRAAAAAGQNLTGPHREAWSTKGS
SYADMYTQNVVISMEEQEEQQRQAMEGKAPKERPVWLTESTVQGAYSEPDAIKSGGDVTP
VAQDATAGHGVGQADENEEVMRALLIHEKRAVAAPGGGGASAAVRKLTSSKANASDSESD
TSESDDDSPAVPAAAAAQHRVEEEDDDDEFEEVGDEPMVMVGGRQFSYREVSQRPELVAQ
MSAQEKEAYIEMGQNLFQDMYF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaccagaggtactgaccgaggtccctgcagcactgaagcggctggccaagcag
gtcgtgaggggcttcttcggagtggagcatgcgttggccctggacgttctcattcgcaac
ccgtgtgtgcgtgaggaggacatgctggagctgctcaagttcgaccgtaaacaactgcgc
tcagtgctcaacaccctcaaggcagacaagtttgtcaagtgtcgcatgcgggtggaaacg
gcccccgatggcaagacaacacggcacaactactacttcatcaactacagggtgttggtc
aacgtggtgaagtataaattggatcacatgcggaggcgcattgagacggatgagcgagac
tccaccaaccgggcttccttccggtgcccctgctgcttctccaccttcacagatctagag
gccaatcagctgtttgacccaatgacaggtacatttcgctgcaccttctgccagaccgag
gtggaggaggacgcgtctgtctgtcccgacggcaggacgcttgtggcgcgcttcaacgag
cagatcgagcccatctacgcgctgctgcgtgagaccgaagatgtcaacttgtctcaggat
ctgctggagcccgagccggctgagatccctgccctcaaacagagccgcgatcgagccgcc
gccgcggccggacagaacctgactgggccgcaccgcgaggcctggtccaccaaaggctcg
tcttacgctgacatgtacacccagaatgtggtcatcagcatggaggagcaggaagaacag
cagaggcaggccatggaaggcaaggccccgaaggagaggccggtgtggttgaccgagagc
acggtgcagggcgcctacagcgagcccgacgccatcaagagcggtggagacgtcacacct
gtggcccaggacgcaacagcaggtcatggagtgggtcaggcggatgagaacgaggaggtg
atgcgcgccctgctcattcacgagaagagagccgtggcggcgccgggcggaggcggagcc
agcgccgcggtcaggaagctcacctcctccaaagccaacgccagcgactccgagagcgac
accagcgagtcggacgacgactctcccgccgtccccgccgccgcagctgctcagcaccgg
gtggaggaggaagatgacgatgacgagtttgaggaggtgggggatgagccgatggtgatg
gtgggcggccggcagttctcctaccgcgaggtgagccagaggccggagctggtggcgcaa
atgtctgcacaggagaaggaggcctacattgaaatgggacaaaacctcttccaggacatg
tacttctga
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integrated database retrieval system
