Pungitius pungitius (ninespine stickleback): 119229248
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Entry
119229248 CDS
T07626
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119229248 (aff3)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119229248 (aff3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
119229248
NCBI-ProteinID:
XP_037345362
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All DBs
Position
10:10551008..10567017
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AA seq
1233 aa
AA seq
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MPTVLAGKGKLSIVGFLLRCAYSQVTRSQHNSCAKEILEDMTQQASGGDQAQRILYIPKE
AKLPAAPQRQSRGDVQLRMTHHPRVAPHKSMLADDLKLSSDDDDTQRATRESASLDVHSL
SAQRAHTHGRRVRHSSSDSSCSSSSVESRSSSSSSSSSSSRCSRSPGHSPDVHPDPASPA
NTQPPCNSKETDHPSAAQWQLDEWLIKPRRKSSTGDQVHSVSRRPPSPHTQRAPSPARSW
DSNQEYSPSQSPIPSPQFNFSQNTSHLPSPGYSYCPSPSPFPSSCPSPGPSPGPSPIPSP
VPSVCPSPCGSLRASRSPSPIHRDPPRSPSPGLPTPSRVRHCPVVQRTQSNPTANSHRTK
SRSWITPLPETNTKSKATSSSYLQPTHQHRPKTRPTQNQDQSKPKTSAVLNCDQIHEHRS
RPKLNFHPSSKPLSEAPKHTSHLDQNQNSRSKHNPNHKPRPSFQSSSHHSSKTSRHLVPT
SCETKSGHIPQSKSATNHNHTGLRCRSNLSLKPRARSSDATAPTSVRVNHTVTTQKKPQS
KEQEVVLIGDHLSQKGSEHKRKEDRQHKKQQGKQERKEDGRLAEEQLLRRPWIHSSAEEE
EEEEEEGVIERQRRREEAARGNRRGRGQQRQCEWQTVLAKERLLTNTEQNRLKEDSHHQS
RAKRAGRSEEERELQQDPSPPPSRSPTPQRPPTSPSVFSAPNSDSESEYQAPITKVPADS
TSYKGLPKRGRQSLGRSGADRPKVVLPRGPTSGHSGEGQQKLYTLVPFGRGEQTTAPSQR
GLRNLVVQIDLCLLKRVPDTTTSSTLKKPSSSSFPSSSKDKQREAMKHLYVPETASKDSK
RKRKSENGVSHRDSKRSIPPAKDLSGQKEPVPQAAERNFVTETVHNGYLEEYLDSKRPLS
PLSPLSDSPQSTKPPLKTKTSEQLHVHVHKNRDKNRDSAIKPKMEGECVKVSRQPQPPSE
SWGAAGHRGAVPNSETAHHAEYYLHEAKRMKHRADAMVDKLGKAVNYVDAALSFMECGKA
MEEGPLEAKSPYTMYSETVELIRYAMKLKSHSGPGARQEDKQLAVLCFRCLALLYWQMFR
LKKDHAFKYSKVLLDYFKVHPKTGLTFQTSPKVPSTPPCWSDSGKSTGAPPSSLSPTAKH
LGRGSHGGSAFSSLISIPQRIHQMAANHLNITNSVLYSYEYWEVADNLTMENKEFFNYLN
TLSGPLTLHSSIAHAVQYTRQALQWIRISAKLN
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtgctcgcgggcaaagggaaactttccatcgtgggttttctactcagatgc
gcgtattctcaggtaacaagaagccaacacaacagctgtgccaaagaaatcctcgaggac
atgacccagcaagcctcagggggtgaccaggcccaacgaatcctctacatccctaaggaa
gcaaaactaccagctgcaccacaaagacaaagtcggggggatgttcagctgcgaatgacc
catcaccctcgcgtggcacctcacaaatccatgctcgctgatgacctgaagctgagcagt
gatgatgatgacactcaaagggcaactcgtgagtcagcttccttggatgtacacagcctg
tcagcacagcgagcgcacacacatggcaggcgagtgagacattccagctcggactcttca
tgctcaagctccagcgtcgagtcgcgcagcagcagcagcagcagcagcagcagcagcagc
cgttgctcccggagccccggccacagcccagacgttcacccggatcctgcgtcccctgcc
aacacgcagccaccatgcaacagcaaggagactgatcacccctctgcagcccagtggcag
ttggacgaatggctgataaagccccggagaaaatcttccaccggtgaccaagtgcacagc
gtttcaagacgtcctccctctccccacacccaaagagcgccgtctccagccaggtcctgg
gacagcaatcaggaatacagcccgagccaaagccctatccccagcccacagttcaatttc
agccaaaacaccagccacctaccaagccctggttatagctactgccctagccccagccca
ttccccagctcatgcccaagtcccggcccaagccccgggcccagcccaatacccagtcca
gttccaagtgtttgccccagtccgtgtgggagcctgagagccagccgtagccctagtcct
atccatagagaccctccaagaagccccagtccaggcctacctactccttccagggtccgg
cactgcccagttgttcagagaacacaatctaacccaacagccaattcacacaggacaaaa
agccggtcatggattaccccattgcctgaaaccaatacaaagagcaaagccacaagcagc
agttatcttcaaccaactcaccaacacaggcccaagacgcgacccacacagaaccaagac
caaagcaaacccaagacgtctgctgttttaaactgtgaccagattcacgaacatagatct
agacccaagttgaactttcatcctagttctaaaccgctctctgaggctcccaaacacaca
tcacatcttgatcaaaaccagaacagcagatcgaaacacaaccctaaccacaagcccagg
ccttcgtttcaatcaagctcacatcatagctccaaaacatcaagacacttagttccaact
agttgtgaaaccaaatctggtcatattcctcaatcaaaatctgcaactaatcataatcat
actgggttgaggtgtagatctaacctcagccttaaacctagggccaggtcttcagacgct
acagccccaacttctgtgcgtgttaatcatactgtaacaacacagaagaaacctcaatcc
aaggagcaggaggtagtcctcataggagatcatctttcccaaaaggggtcagaacacaag
agaaaagaagacagacaacataaaaaacaacaagggaaacaggagagaaaggaagacggg
aggctggcggaggagcagctcctgagacgtccctggatccacagttcggcagaagaggag
gaggaggaggaggaggagggagtgatagagaggcagaggaggagagaggaggcagcaaga
ggaaaccgtagaggaaggggacagcaacgtcagtgtgaatggcagacagtcctggccaaa
gagagactgctaaccaacactgagcagaaccgcctcaaagaggactcgcaccatcagagc
agggcaaaaagagcagggagaagtgaggaagagagagagttacagcaagacccgtcaccg
cctccgtcacgttcgccaactcctcaaagaccacctacctcgccttctgtcttctccgct
ccaaactctgattcagaatctgaatatcaggctccgatcaccaaagttccagcagactcc
acctcttacaagggactccccaagagggggcggcaaagtctcggcaggtccggtgcagac
aggccgaaagtcgtgctccccagaggacccacctcgggtcattcaggtgaggggcagcaa
aaactctacaccttggtcccattcgggcgaggtgaacaaactacagcgccttcccagcga
gggcttagaaatctggtggtgcagatagacctctgccttctcaaaagggtcccggacacc
acgaccagttccacccttaaaaagccctcctcctcttcgttcccatcatcctcgaaggac
aagcaaagagaggccatgaaacacctgtacgtccctgagaccgcgtcgaaagacagcaaa
aggaaacgcaagtcggagaatggtgtgtcacacagagatagcaagaggagcattccccct
gcgaaggacctctcaggccagaaggagcccgtacctcaggccgcggagcgcaactttgtg
acggagaccgtgcacaacgggtacttggaggagtacttggacagcaagaggccgttgtct
cccctctctccactgtccgacagccctcagtccaccaagccccccctcaaaacaaagacc
tcagagcagctccacgtccatgtccataaaaacagagacaagaatcgagattctgctata
aagcccaagatggagggggaatgtgtgaaagtgtcaagacagccccaaccgccatccgag
tcttggggcgccgcaggacacaggggggccgtgccaaacagcgaaaccgcccaccatgcg
gagtactacttacacgaagctaaaaggatgaagcaccgggcagacgcgatggtggataag
ctggggaaggctgtgaattacgtggacgctgccctctcctttatggaatgtgggaaagca
atggaggaagggccactcgaggccaagtctccttataccatgtactccgagacagtggag
ctgattaggtatgcaatgaagctgaagagccactctggccccggggcgagacaggaagac
aagcagctggccgttctgtgcttccgatgccttgccctcctttactggcaaatgtttcgt
ttaaagaaggaccatgcgtttaagtattccaaagttctgctggactactttaaggtacat
ccaaaaacaggtctgacgttccagacttctcctaaagtgccttctacaccaccctgttgg
agtgactctgggaagagcacaggagcacccccttcctcgctctcccccactgccaaacac
ctcggacgggggtcacacgggggcagcgccttctcctcccttataagcattccccaacgt
atccaccagatggcagcaaatcatttgaacattaccaacagtgtcctgtacagctacgag
tattgggaggtggcagacaacctcacaatggagaataaagagttcttcaactacttgaat
actttgtctgggcctttgactcttcacagtagcatcgctcacgccgtccaatacaccaga
caggctcttcagtggatacgcatcagtgccaaacttaactaa
DBGET
integrated database retrieval system
