Pungitius pungitius (ninespine stickleback): 119229324
Help
Entry
119229324 CDS
T07626
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2-like isoform X1
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ppug00536
]
119229324
Glycosaminoglycan binding proteins [BR:
ppug00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
119229324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
Motif
Other DBs
NCBI-GeneID:
119229324
NCBI-ProteinID:
XP_037345500
LinkDB
All DBs
Position
10:20868293..20885720
Genome browser
AA seq
971 aa
AA seq
DB search
MSLPGLKSETTRSWQQMCITPTQRSPEDAEAPELEENDEGDAVQEAAAIVPEVVESPMDN
DIPLQPPNPALLEQVVELSILLSGETYSNNLDDPASLHHQSLSRQFAGKMEDALEGLPGF
KGMSVLDFRPQKDTQGLGNVVVVYAVTVAVDGAGLSNDQLDYLTLQSNRVENWYREVVEL
STEVYTIRNVNTEDPQGNEVERVSEGAESDNAADAVMIDAVEEPPQAPILEEDADVVKED
YALPEPSETDAVSDTENDVIFLEEGEVVSPAPGLTTGAPEAGSIEEEGLLLDDTLQTPAV
ETHLPEELPAELPSSELPEGVTLPEPPVEVEASGLTTVDLEDLLHPSTPTAEGEVSFKET
GAEDGPITEDVEVAAVGEEPTVYEAEMPEELEAATIAAETVTEGLPVLVPPAEAVDVESE
AEPEAEPEATETGLLPDGEELVVGTGESSPADVPSADEEVNPKQPAEEGDIGKVGTYPEE
HVVESGSMEEAKESQEGHDVRKETAPEAPPAEAAPGISREDLTEDEVLLVNRDQLQPAPE
SESPFTHISEVDPSTQRQPDIIIPLVVEIQTTEQGLKDEERDYDVIHYSYDLINHTEEGS
TGFPFGTDRASIAMPANPGRALMVFFSLRVTNMIFSDDLFNKSSPEYKALEQRFIELLVP
YLQSNLSNFENLEILNFRNGSIVVNSRMKFGKPVPQSVTTTVYLILEDFCNTAYQTMNLA
IDKYSLDVESGDKADPCKFQACNEYAECQVNKWSGEGECVCNAGYFSVEGLPCQSICELH
TDFCLNDGKCDIIPGQGAICRCRVGENWWYRGEHCEEYVSEPLVVGIAIASVAGFLFVAS
VVIFFLARTLRDQYDKDESEDPIRRAESLPSLERATKYNPMYESEATTGYSHYYRRYPEA
LVYSSASAEASTDFSSEEIRHIYENSELTKEEIQDRIRIIELYAKDRQFADFVRHHQAVV
DTRRESSSAHT
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtcactaccaggtttgaaaagtgaaaccaccaggtcctggcagcaaatgtgcatcact
cccacacaaaggtcaccagaagatgctgaggctcctgagctggaagagaatgatgaaggt
gatgcagtgcaggaagcagccgctatcgtcccagaggtggtggagagtccaatggacaat
gacattcccctgcagcctcccaaccccgcgctgctggagcaggtggtggagttaagcatc
ctgctgagcggggagacgtacagcaacaacctcgacgatccagccagcctccaccaccaa
agtcttagcagacagtttgctggaaagatggaggacgctctggaggggcttcctggattt
aagggtatgtccgtactggacttcaggccccagaaggacactcaagggctgggtaacgtg
gtggtggtctacgccgtcacagtagcggtggatggagcaggactgagcaacgatcaactg
gactacctcaccttgcagtcgaaccgggtggagaactggtaccgtgaggtcgttgagctc
tccacggaggtctacaccatcagaaacgtaaacactgaagacccgcaaggcaacgaggtg
gaaagggtgtctgagggcgccgagtctgacaatgcagcagacgcagtcatgattgatgct
gttgaggagccaccacaggcccccatcctggaagaggacgcagatgttgtcaaagaagac
tacgccctgcctgagccctctgaaaccgacgcggtgtcagacacagaaaatgacgtaatt
ttcctggaggagggcgaagttgtgtctcctgctcctggacttaccactggtgcacctgaa
gctggcagcattgaggaggagggtctgttgctggatgacactttgcagactcctgctgtg
gaaacccatctaccagaggagctcccagctgagcttccctcctctgagctgccagagggc
gtcacactgcctgaacccccagtggaggtggaggcctctggtttgaccacagttgacctg
gaggacctgctccacccttctacgccgacggcggaaggagaagtttcctttaaggagact
ggcgcagaagatgggccgataacagaagatgtcgaggttgcggcagtgggagaagaacct
actgtatatgaggctgagatgccagaggagcttgaggccgctacaattgcagcagagacc
gtaacagaaggcctgcctgtgctggtcccacctgctgaggctgtagatgtagagagtgaa
gcagagccggaagctgagccggaggcaacagaaacgggtctgcttcctgatggtgaagaa
ctggtggtgggtacgggagaatccagccctgcagatgttccatctgcagatgaggaagta
aatcccaaacagcccgcggaagaaggggacatcggtaaggtggggacctatcccgaggaa
catgtagttgaatccggtagcatggaggaagcaaaagagagccaagagggacacgacgtg
aggaaagagacggcacctgaagctccccctgcagaggcagctccaggtatctccagagag
gaccttacagaggatgaagtcttgctggtcaacagagatcaactccagccagctccagag
agcgagtcgcctttcacccatatctctgaagttgacccttccacccaaaggcaacctgac
atcataatccctttagtggtggagatccagaccactgagcaaggcctgaaggatgaagaa
cgagactatgatgtgatccactatagttatgatttgattaaccacacagaggagggcagc
accggctttccgttcggcacagaccgagccagtatcgccatgcctgcgaaccctggacga
gcactgatggtgttcttcagcctgcgggtgaccaacatgatcttttcagatgatctcttt
aacaagagctctcctgaatacaaagctttggagcagcgtttcattgagctgcttgtgcca
tacctgcagtccaacctgagcaactttgagaacctggagatcctgaacttcaggaacgga
agtattgtcgtcaacagccggatgaaatttggaaaacctgtgccacaaagtgtcaccacc
acagtctatctgatcctggaggacttctgtaatacagcctaccagactatgaacctggcc
atcgataagtactcactggacgtcgagtcaggtgacaaggccgacccctgtaagttccag
gcgtgtaatgagtacgcagagtgtcaggtgaacaagtggtcgggggagggagagtgcgtc
tgcaatgctggctacttcagcgtggaaggcctgccctgtcagagtatctgtgagctgcac
actgacttttgcctcaatgacggcaagtgtgacatcatccctggccagggcgccatctgc
aggtgtcgtgtcggagagaactggtggtacagaggagagcactgcgaggagtacgtgtct
gagccgctggtggtcggcatagcgatcgcctccgtagccggattcctctttgtggcgtct
gtggtcatcttcttcctcgccaggacgttacgggatcagtatgacaaggatgagtcagag
gaccccattcggcgagcagagagcctcccgtctctagaaagggcgaccaagtacaacccc
atgtatgagagtgaagccaccaccggctacagccattactaccgccgctaccccgaggct
ctcgtgtacagcagcgccagcgcagaggcctccaccgacttcagcagcgaggagatacga
cacatctacgagaacagtgaactgaccaaggaggaaatccaagacaggatacgcatcatt
gagctctacgcgaaggaccggcagtttgcagactttgtacgccatcatcaagctgtcgtg
gatacccgcagagagagctcatctgcacacacatga
DBGET
integrated database retrieval system
