Pungitius pungitius (ninespine stickleback): 119229396
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Entry
119229396 CDS
T07626
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04060
Cytokine-cytokine receptor interaction
ppug04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119229396 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119229396 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ppug04052
]
119229396 (gdf5)
Cytokines and neuropeptides [BR:
ppug04052
]
Cytokines
Transforming growth factors (RSTK binding)
119229396 (gdf5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
119229396
NCBI-ProteinID:
XP_037345577
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Position
8:4695155..4701825
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AA seq
580 aa
AA seq
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MNVVTCLSLLLSCWTLIDLHPVLGSLSRTRPTEQHHHHPPHSHRLGEAKGRTAGGEEREQ
AHGRPASRLPATAPGTWKPSPVNPARITRIRAEPPLIKVEKTVNKNKPAASSAQADRAQQ
LLQPRDGSASLVHGEAVRSWLPGGHAQIKAHAPAGFSAHGAGKGVVAAAAGVAGAVSPGK
KLGKGASSSSAAAPVRTAPPQRSIRAQHAGPAAQRGVSGKAPKGSDREAPQRQPLVVPHD
YMLSLYWSLSRGDMNSSALHDAGLANTITSFVDKGQDERGPQLRRQRYLFNVSSLERDGL
LGAELRILRRRQSDPRRASLGAPCLKLYTCASGKQPAAPLQTKTAEDLLNWEVFDVWKVF
KGLRNLQRQRSQQLCFELEALEQRGGRPVDLRALGFARPGRTNKEKAFFLAFGRSEKRDL
FYNEIKARSGHDNKTVYEYLFTQRRTRRAPAARAVKKSPPPPPPPPQHQVVKMQTRPRCH
RRRLHVNFKEMGWDDWIIAPLEYEAFHCDGVCDFPIRSHLEPTNHAIIQTLMNSMDPEST
PPTCCVPTRLSPISILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgtgacgtgtctctctcttctgctgagctgctggactctcatcgacctgcat
cccgtcctcgggtcgctcagccggaccagaccgaccgagcagcaccaccaccacccccca
cactcccaccggctcggagaggcaaaagggcgcacggcaggcggcgaggaaagagagcaa
gcgcacggaagacccgcgagcaggttaccggccactgcccccgggacgtggaaaccgtcc
ccggtgaacccggcgaggattacgcgcatccgcgcggagcctccgttaatcaaagtcgag
aagacggttaataaaaacaaacccgctgcgtcctccgcgcaagcggatcgggcacaacag
ctgctgcagccgcgggacggatcggccagcttagtgcacggggaggccgtgcgctcctgg
ctgcccggcggacacgctcaaatcaaagcgcacgctcccgctggttttagcgcacatgga
gcggggaagggagtcgtcgctgcggccgctggggtcgcaggagctgtctcgccggggaag
aagctggggaaaggtgcttccagttccagtgcagctgctccagtgcgcacggcgcctccc
cagagatccatccgtgcgcagcacgcgggtccggcggcgcagcggggagtcagcggaaag
gcccccaaagggagcgaccgggaggcgcctcagagacagccgctggtcgttcctcatgac
tacatgctgtcgctgtactggtctctgtcccgcggggacatgaacagcagcgccctgcac
gacgcgggtctggccaacaccatcacgagcttcgtggataaaggacaagacgagcgaggg
cctcagctcaggcggcagaggtacctcttcaacgtcagctccctggagcgagacgggctc
ctgggggccgagctgcgcatcctgaggaggcgccagtctgacccccgcagggcctcgttg
ggggccccatgcctgaagctgtacacctgcgcttcgggtaagcagccggccgctcctctg
cagacgaagaccgccgaggatctgctcaactgggaagtgttcgacgtgtggaaagtcttc
aagggcctcagaaacctgcagaggcagcgctcccagcagctctgcttcgagctggaggcc
ctggagcagcgaggcggtcgccccgtggatctgcgcgctctgggcttcgcccggcccggc
aggaccaacaaggagaaggccttcttcctggcctttggcaggagtgaaaagcgcgacctc
ttctacaacgagatcaaggcgcggtcgggccacgacaacaaaaccgtctacgagtacctc
ttcacgcagcggcggactcggcgggctcccgcggcgagggcggtgaagaaatcgccgccg
cctccaccgccgccgccacagcaccaggtggtgaagatgcagacgaggccgcgctgtcac
cggaggcgcctccacgtgaacttcaaggagatgggctgggatgactggatcattgcgccg
ctggagtacgaggccttccactgcgacggcgtctgcgacttccccatccgctcgcacctg
gagcccaccaaccacgccatcatacagaccctgatgaactccatggacccggagtcgacg
ccgcccacctgctgtgtgccgacccgactcagcccgatcagcatcctctacatcgactcg
gccaacaacgtggtgtacaagcagtacgaggacatggtggtggagtcctgtggctgcagg
tag
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