Pungitius pungitius (ninespine stickleback): 119229404
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Entry
119229404 CDS
T07626
Symbol
msx1a
Name
(RefSeq) homeobox protein MSX-1a
KO
K09341
homeobox protein MSX
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119229404 (msx1a)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
119229404 (msx1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
119229404
NCBI-ProteinID:
XP_037345589
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Position
8:complement(17513428..17515323)
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AA seq
282 aa
AA seq
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MAPSIAMSALTAGLKTEDLPPRSVLVSRGEMHTSLSPAKETVKPKVAILPFSVEALMADR
KPSREVVSPDATSIPGTSHALVKGARMGSFGSLDTPVPALSMSSSFSVGDIMNMPEDVLI
KPESPDSNERTSWLQSPRFSPTPPRRLSPPACPLRKHKTNRKPRTPFTTSQLLALERKFR
QKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPAFGI
SFPLGAHVPASYGSHPFQRHSLPVSPMGLYAAHVGYSMYHLA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggccccatcgatcgccatgtcagctttgaccgctggtttgaaaactgaagatcttccg
ccccgctcggtcctcgtcagcagaggcgagatgcacaccagtctgagccccgctaaggag
accgtgaagcccaaagtcgctattttgccattcagcgtggaggcactgatggccgatagg
aaacctagcagagaggtggtatccccggacgccacgtccattcccgggacgtcccatgcc
ctggtaaagggcgcacggatgggttctttcggtagtctggataccccggttcctgcttta
tcgatgagctcctcgttttcagtgggcgacatcatgaacatgccagaagatgtgttgatt
aaacccgagagcccggacagtaacgagaggacttcctggctacagagtcctcgtttttct
cctacacctccacgaaggttaagtcctcctgcctgtcctctacgaaaacacaagaccaac
agaaagcctcggacccccttcaccacgtcccagctgctggccctggagaggaagttccgc
cagaagcagtacctttccatcgccgagcgcgcagagttctccagttccctcaacttgacg
gagacccaggtcaaaatctggtttcagaacagaagagccaaagccaagcggctgcaggag
gcagaactcgaaaaactgaaaatggcagctaagcctatgctgcccccagctttcggcatt
tccttccctctcggtgcgcacgtccccgcgtcatacgggtcgcacccgttccagaggcac
tcgctgccggtttcccccatgggactgtacgccgctcacgtcggatacagcatgtaccac
cttgcttga
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