Pungitius pungitius (ninespine stickleback): 119229415
Help
Entry
119229415 CDS
T07626
Symbol
cacna1da
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1D subunit, a isoform X3
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010
MAPK signaling pathway
ppug04020
Calcium signaling pathway
ppug04218
Cellular senescence
ppug04260
Cardiac muscle contraction
ppug04261
Adrenergic signaling in cardiomyocytes
ppug04270
Vascular smooth muscle contraction
ppug04530
Tight junction
ppug04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119229415 (cacna1da)
04020 Calcium signaling pathway
119229415 (cacna1da)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
119229415 (cacna1da)
09144 Cellular community - eukaryotes
04530 Tight junction
119229415 (cacna1da)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
119229415 (cacna1da)
09153 Circulatory system
04260 Cardiac muscle contraction
119229415 (cacna1da)
04261 Adrenergic signaling in cardiomyocytes
119229415 (cacna1da)
04270 Vascular smooth muscle contraction
119229415 (cacna1da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119229415 (cacna1da)
Ion channels [BR:
ppug04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119229415 (cacna1da)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
FAM176
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
119229415
NCBI-ProteinID:
XP_037345611
LinkDB
All DBs
Position
8:22233957..22279816
Genome browser
AA seq
2116 aa
AA seq
DB search
MSANGPAPDPAPAAPEAPPASTAAPAPAPAAAPAAAAPPAPPALPAPVSSTIPVGALAQK
KRQQYAKSKKQGSNANSRPPRALFCLKLNNPIRRACISLVEWKPFDIFILIAIFANCMAL
AVYVPFPADDSNSTNHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFV
IVVIGLFSVVLELLTKEEKAEAEGDIEHLSMQGHGGKPGGFDVKALRAFRVLRPLRLVSG
VPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCFIPGSDMIAEEE
PAPCAISGHGRQCPINGSECREGWHGPNGGITNFDNFLFAMLTVFQCITMEGWTDVLYWM
NDAMGLELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEE
DLKGYLDWITQAEDIDPDNEDEADEGSKRNRVTLADLTEKKKGRFGWFSQSSDTHASVPA
SETESVNTENQNGEDEKTPCCGPLCQKISKSKFSRRWRRCNRFCRRKCRVAVKSVPFYWL
VIILVFLNTLTISSEHYNQPMWLTQVQDVANKVLLALFTCEMLVKMYSLGLQAYFVSLFN
RFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNSMK
SIASLLLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWN
AVMYDGIMAYGGPSSSGMIVCFYFIILFICGNYILLNVFLAIAVDNLADAESLNTDEGDK
KGDKKDEGKDEKEDEEENDDTAAEEEDPEVPAGPRPVLSDLVKKEKITPIPEGSAFFIFS
STNPFRVFCHKLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIILGYFDYAFTAIF
TVEIVLKMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLR
PLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKS
NSEECKGTYILYKEGDVNQPTIHKRQWHNSDFNFDNVLMAMMALFTVSTFEGWPSLLYKA
IDSNRENLGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDK
NQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVLIMLNTLCLAVQHYGQS
ALFNYVMDILNMVFTAVFTVEMVLKLIAFKPRHYFADAWNTFDALIVVGSVVDIAITEVN
PTETPVVDEQGNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVA
LLIAMLFFIYAVIGMQVFGKVAMVDGTHINRNNNFQTFPQAVLLLFRCATGEAWQEIMLA
CMPGKLCDPESDYNPGEEMTCGSGFAIIYFITFYMLCAFLIINLFVAVIMDNFDYLTRDW
SILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAM
NMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVVP
PAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVGAHPSQNNTAIALQAGLRTLHDIGPE
IRRAISCDLQDDELVDFIPEEDEEIYRRNGGLFGNHLMNGGHRRSNGHQTNATQRPLQVQ
PPPHYAHMDQPVGRLSRANAMSQPNHHHHHHHNRHHSSYGKSPKSTNINLNNANASSLPN
GGHHRYYEHAPPNGYPGLHNSYYEYDKPRTPQGQRRRYYETYVRSHGADGHHPTIRREEE
FDEDRLSGEYYSGEEFYEDDSMLSGDRYQNSDAEYETPKGYHHPDSYYDDDEQPLYRDSR
RSPKRRLLPATPQGHRRPSFNFECLRRQSSQDELPHQRTALPLHLMQQQVMAVAGLDSSR
AHRLSPTRSTRSWATPPATPASKDQSPYYTPLIRVDHPHRQSAASSQVSVRKSSWYTDDP
EFSQRMYSPVHLQVPPEYHNQYHQKRGSATSLVEAVLISEGLGRYAKDPKFVAATKHEIA
DACEMTIDEMESAASHLLNGGIAPSANGVNVFPLLTASDYELQDAAASYSDEEPDTEPRA
RYEEDLADEMICITTL
NT seq
6351 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaacgggcctgccccagaccccgcccccgccgccccggaggcccctcccgcc
tcaaccgctgccccggccccagcccctgccgcggcccctgcagcagcggcaccacccgca
cctcctgccctgcctgccccagtgtccagtaccatcccggtcggtgcgttggcccagaag
aagaggcagcagtatgccaagagcaagaaacagggcagcaatgccaacagcaggccgcca
agggctctgttctgcctcaaactcaacaacccgatacgcagggcctgcatcagcctggtg
gagtggaagccatttgatatctttatattaattgcgatctttgccaactgtatggcctta
gctgtctatgtacccttccctgcagatgattccaactccaccaaccacgacctggaaacg
gttgagtatgccttcctcatcatattcacgattgaaacctttctgaagattatcgcttac
ggtttggtgatgcaccagaacgcgtacgtgagaaacggctggaacatgctggatttcgtc
attgtcgtcattggactctttagtgttgtgttggagcttttgaccaaagaagagaaggcg
gaagcagaaggagacattgaacatctgtcgatgcaaggacacggcggcaaaccaggtgga
ttcgatgttaaagccctccgagccttccgggtgctgcgccccctgcggctggtctcaggg
gtacccagtttacaggtggtgttgaactccatcattaaagccatggtccctctccttcac
atcgccctcctggtcttgtttgtcatcatcatctatgctattatcggcctggagcttttc
attggtaaaatgcacgcaacctgcttcattcctggctcagacatgatcgcagaagaggaa
ccggctccatgtgcgatctcgggtcacgggcgccagtgccccatcaacggcagcgagtgc
agggagggctggcacggccccaacgggggcatcaccaacttcgacaacttcctgtttgcc
atgctgacggtgtttcagtgcatcaccatggagggctggaccgacgtgctgtactggatg
aacgatgcgatgggcttagagcttccgtgggtttactttgtcagtcttgtgatcttcggc
tccttttttgttcttaacctggtgttgggtgtgttgagcggagagttctccaaggagaga
gagaaggccaaagctcgaggagatttccagaagctgcgtgagaagcagcagctggaggag
gatctgaagggttacttggactggatcactcaggccgaagacatcgaccccgacaacgag
gacgaggccgacgaggggagcaagcgcaaccgggtgactctggctgacctcactgagaag
aagaaaggaaggtttgggtggttcagtcagtcgtccgacactcatgcgagcgttccagcc
agcgaaactgaatcagtaaacaccgaaaatcaaaatggggaggacgaaaagacgccatgc
tgtggacctctgtgtcaaaagatttccaagtcaaagttcagtcggcgctggcgccgctgc
aacaggttctgccgcaggaagtgtcgggtggcggtcaaatcggtgcctttctactggctg
gtgatcatcctggtgttcctcaacacgctcaccatctcatccgagcattacaaccagccc
atgtggctgacacaagtgcaggatgtggccaacaaggtgctgctggccctgttcacgtgt
gagatgttggtgaagatgtacagtctcggacttcaggcctacttcgtctcgctgttcaac
cgcttcgactgctttgtggtctgtgggggaatcacggaaaccattctggtggagctggaa
atcatgtctcctctcggtatctctgtgttccgctgcgtccgcctgctgaggatcttcaag
gtcacgcgtcactggcagtctctgagtaacctggtggcctctctgctcaactccatgaag
tccatcgcttctctgctgctgctgctcttcctcttcatcatcatcttctccctgctggga
atgcaggtgttcggcggaaagttcaacttcgacgagacccaaaccaagaggagcaccttc
gacaactttccccaagccctcctcactgtgtttcagatcctgaccggagaagactggaac
gctgtcatgtacgacggcatcatggcgtacggagggccgtcctcctccgggatgatcgtg
tgcttttacttcatcatcctgttcatttgtggaaactacatcctcctgaatgtcttcttg
gccatcgctgtggacaacctggcagacgcagagtcgctcaacacggacgaaggagacaag
aaaggggacaaaaaggatgagggaaaagatgagaaggaggacgaggaggagaatgacgac
actgcggcagaggaggaggacccagaggtccctgcagggcctcggccggtcttatctgac
ctggtaaagaaggagaagatcactcccatcccagagggaagcgccttcttcatcttcagc
agcacgaacccgttccgcgtgttttgccacaagctgatcaaccaccacatattcaccaac
ctcatcctggtgttcatcatgctcagctccgtgtcgctcgccgctgaggatcccatcaga
aacttctccgctcgcaacattatacttggttactttgactatgctttcacggctatcttt
actgttgagatcgtattgaagatgacaacatatggagccttcctccataaaggggcattc
tgtaggaattacttcaacctcctggacctgttggtggtgggagtatccctggtttccttc
ggcattcaatcctcggccatctctgtggtgaagattctgcgggtcctgcgtgttcttcgc
cccctgagggccatcaaccgagccaaaggcctgaagcacgtggtgcagtgtgtgtttgtg
gccatcaggaccatcggtaacatcatgatcgtcaccactctgctccagttcatgttcgcc
tgcataggagtgcagctgttcaaggggaagttctaccgctgcacggatgaagcaaagtca
aactcagaagagtgcaaaggcacctacattctgtataaggaaggagacgtgaaccagccg
accatccacaagcgacagtggcacaacagtgacttcaactttgataacgtcctcatggcc
atgatggctctgttcaccgtgtccacttttgaaggctggccttctttactgtacaaggcc
atcgactcaaacagggagaacctgggtcccatttacaactaccgcgtggagatttccatc
ttcttcatcatctacatcatcatcatcgctttcttcatgatgaacatctttgtgggtttc
gtgatcgtcacgtttcaggaacaaggagagaaagagtacaaaaactgtgagctcgacaag
aaccagcgtcagtgtgttgagtacgctctgaaggcgcgtccattgaggaggtacatccct
aaaaacccgtaccagtataagttctggtacgtggtgaactccactgggtttgagtacatc
atgtttgtgctcattatgctcaacacgctgtgcctggctgtgcagcactacggacagtca
gcgctctttaactatgtcatggacattctaaatatggtcttcactgctgtcttcactgtg
gagatggttctcaaactcatcgctttcaaacctcggcactatttcgccgatgcttggaac
acatttgatgccttaattgttgttggtagcgtcgtcgatattgctatcactgaagttaat
ccaacggagacgcccgtggtggatgagcaggggaacacggaggacagtgcgcgcatctcc
atcaccttcttccgtctgtttcgagtcatgcggctggtgaagctcctcagcagaggggag
ggcattcgcaccctgctctggactttcatcaagtccttccaggctctgccatacgttgcc
ctcctgatagccatgctgttcttcatctacgccgtcatcggcatgcaggtgtttggaaag
gtcgccatggtggacggcacgcacatcaacagaaacaacaacttccagacttttcctcag
gccgtgctccttctcttccggtgtgccacaggagaggcgtggcaggagatcatgttggcc
tgcatgccggggaaactgtgcgacccagaatccgactacaaccccggggaggagatgacg
tgcggcagcggatttgcaatcatttacttcatcaccttctacatgctgtgcgccttcctg
atcatcaatctgtttgtggccgtcatcatggacaactttgactatctaacacgtgattgg
tcaattctcggtccacaccacctcgatgaattcaagagaatttggtcagagtacgaccca
gaggcaaagggcagaattaaacatctggatgttgttacactgcttcgtcgtatccagccg
cctctcggctttggaaagctgtgccctcacagagtggcttgcaagagattggtggccatg
aacatgcctctgaacagtgacggcaccgtcatgttcaacgccactttgtttgctctggtg
cgcacggccctgaagatcaaaacagaaggtaatctagagcaggccaacgaagagctgcga
gcggtcatcaagaaaatctggaagagaaccagcatgaagctgctggaccaagtggtgccc
cctgctggtgatgatgaggtaaccgtggggaagttctatgccaccttcctgatacaggac
tactttaggaaattcaagaaacgtaaagaggaaggcctggtgggggctcacccgtcgcag
aacaacacagccatcgctttacaggctggccttcgcacgctgcatgatattgggcccgaa
attcgacgagcgatatcatgtgatctgcaagatgacgagctagtagactttattccagag
gaagacgaggaaatttataggcgtaacggcggactcttcggtaaccacctcatgaacggt
ggtcaccgccgctccaacggccaccagaccaacgccacgcagcggcctctgcaggtgcag
cctccgcctcactacgcccacatggaccagccggtgggacgcctgtcccgagccaacgcc
atgtcccagcccaaccaccaccaccaccaccaccacaaccgccaccacagctcctacggc
aagtcccccaaatccaccaacatcaacctcaacaacgccaacgcgtccagtctgcccaac
ggagggcaccaccggtactatgaacacgcccctcccaatggctacccggggcttcacaac
tcctactacgagtacgacaagccacggaccccccagggacaaagaaggcgctactatgag
acctatgttaggtcacacggggcagacggacaccaccccaccatccgcagggaggaggag
tttgatgaagaccgcctctctggggagtattacagtggggaggagttctatgaagacgac
agcatgctctcaggggacaggtatcagaacagcgacgcagagtacgagactccaaaaggt
taccaccaccctgacagttactacgacgacgacgaacagcctctttaccgcgactcacgg
aggtcaccgaagagacggttgcttcctgccacgcctcaaggtcacagaaggccatccttc
aactttgagtgtctgcgcagacaaagtagccaggacgagcttccacatcagcgtactgct
ctcccgctgcacctcatgcagcagcaggtcatggccgtagcaggcctggactccagcaga
gcccaccgcctctccccgacccgctccacccgctcctgggccactcctcccgccacgccg
gcaagtaaagaccagtcgccgtactacacgcctctgatccgcgtggaccacccacacagg
cagagcgccgccagcagccaggtgtctgtgcggaagagctcgtggtacacggacgacccg
gagttctcccagaggatgtactcacctgtccacctgcaggtgcctcctgaataccacaac
cagtaccaccagaagagaggcagcgccaccagcctcgtggaagcggttctgatatcagaa
ggactcggcagatacgctaaggatcccaagtttgtcgccgccacgaagcacgagatcgcg
gacgcgtgcgagatgacgatcgatgagatggagagcgccgccagccacctgctgaacgga
gggatcgccccgagcgccaacggggtcaacgtgttcccgctgctcactgcgagcgactat
gagctgcaggacgctgcagccagctacagcgacgaggagccagacacggaaccgagagcc
cggtacgaggaggacctggcggacgagatgatctgcatcacgactttatag
DBGET
integrated database retrieval system
