Pungitius pungitius (ninespine stickleback): 119229425
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Entry
119229425 CDS
T07626
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X4
KO
K20915
tumor suppressor p53-binding protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119229425 (tp53bp1)
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
Tudor_5
RTT107_BRCT_5
Tudor_3
DUF4537
Tudor_2
SH3_Hsr9
Motif
Other DBs
NCBI-GeneID:
119229425
NCBI-ProteinID:
XP_037345685
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All DBs
Position
4:23768125..23787174
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AA seq
1645 aa
AA seq
DB search
MDPGGSELDSSLPQPENPCLIVEDSQPDSVALEDDPESSYRALLARRLSSLQPTSRSPVL
ELISSPLGSRYSQSDSQSESSRSNNQAEPGILMAANPSSAFEEESQVLNMNPPNKKKCAP
EEPDVGSGADSTTHCVQSEGGASQFGFLELSQSQDVRGEMLEEQEEDDVPRPDSERRTKL
AEQNVGCRTPEGRDHKAARSEVSSSSSLESSGRSGRKMGIQALLHSEGLEASDEQGRDIL
SSQEDMFDADKTGAAVDSTVSEPEQQGAPTPTPAHTLGLLHLSGQQTLVQLSLSQGSIDY
VGPTPDTFTQTPLIVPSSPTGPESQRGADEAMDTSLPPGDGEKVEEEEPMDTEAASKPRP
SASTPVSQNPPGFVLDRTLSLPSQPEFSHDAFVPTPSRETPTPSETPSQWPESAPPAPPL
RLSADSPPEDEEDSQATQIEEPEEAPACDSAAPPRAGAGDDNGVAPEARTAAEAESPRRP
DVHDKTSLNVETANVKEASPAHLASCSQLRSDSSDLTVDSCVRETPPADPAPPCAPPTPA
GRDGGGGAKSPSVRASSQKSAAGGNSQEVSEEADGRGEAEEEEEVMEEGLGMAFVLSQSQ
LLSPEPMEAADCGDRAEDSVVVVTDSVRDSQALQKDAAPPPKASSSPPASTNGHQPQAHA
GEAHAAPDRPGAGPDPEGLREKSLSDSSGDLSFHFTLPKEGELIGPVVGATPPLISQLKQ
TLRHSTPIEITSFSEKSGLGGNGSMAASNIASGESGDEAAEKGDGKLSLRMKLVTPVEEG
SSERFSLQKPALSDEDEPVAMVTTVANAVASPSVFTRVRQVHRQQEAREDLQGGGHTTPV
SRGQLFAPPQRSSPASSLGCNSLPNSQSEPPPQEASPRETRKAPPTNEPSEHTQAPPPEA
PAPNKADARLRAAAVSSPSKLRQRTVSQQTSFDAPGQRSPAGRGEPESPSFRRAAGPAHR
RHVRTIQEVRTTVTRVITDVYYDDGKEVERKVTEENEEPVVDCQVLDSDISPCRTGSSMT
SGDLGDISSLSSKASSLQHSSGGTSSSGFTRPDLIMPPSRGALSPRRGGGQQQRGHRGHR
AGSVVTVNRGYGTPGSRALAPLTPRGRARRGRPPSRSSMSRGGAAGSLPRQPHSSSEDEP
FARMLPPRLPLSPAEAEPHARSDSLRSSPEEAGRGGGGGSSLVGLRVVAKWSSNGYFYSG
RIVRDTGEGRFRLRFDDGYECEVAGRDILLCDPIPLETEVTALLEDEYFSIGVVRGHKTE
GQDLFYSVEKDAQRQWYNRTAIILSLEQGNKLREQHSLGPYEPSTPLAKASDISLDNLVE
GKRRRRGGAPEGQNTPNRGSSSSPRTPGPSGKRKLLSSEESRSPAKRGRRGSGARAAQRV
GVCNTSGSGTDLPAPSGEAAETHGPLPQNTTLFMGFAFMLTASSEIDRLTNRPGSDDEDD
YVETGPYNKAYTESQLQAGGGFVLQDFNEEQCKAAYQSLLIADQHCRTRKYLLCLASGVP
SVSHLWVRDCCRENKLLNYRNYLLPAGVGPDEALVEWHPRCSPFKALRVLLVFEKPVELW
AQLISMGGGSSVRQFPADKDSSDIPAGRYEVVVTDSACPAWVETEVTSQDVPLVSPEWLI
QSVIRGERLGFHSKPQYRHDYASSS
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcggaagtgaactggactccagcctgcctcagcccgagaacccgtgcctg
atcgtggaggactcccagccggacagcgtcgcgctggaggacgacccggagagcagctac
cgagctctgctggcccgccgcctgtccagcctgcagcccacctcccgcagcccggttctg
gagctgatctcctcgccgctgggaagcagatactctcagagtgacagccaatcagagagc
tcccggagtaacaaccaagctgaacctggcattctaatggcggccaaccccagcagtgca
ttcgaggaggaaagtcaagtgctcaacatgaaccccccgaacaagaaaaagtgtgcacca
gaggagcctgatgtgggttctggagcggactctaccacacactgcgtccagtccgagggg
ggagcctctcaatttggttttctggagctctcccagagccaggatgtgcgtggtgagatg
ctggaggagcaggaagaagatgatgttcctcgaccagacagcgagagacgcaccaagcta
gcagagcagaacgtcggctgcaggactccggagggtcgggaccacaaagccgcgaggtcc
gaggtgagctccagcagctccctggagtcttcgggtcggtcggggaggaagatgggcatc
caggctctgctgcactctgagggcctcgaggcctccgacgagcaggggcgggacatcctg
tcctcgcaggaggacatgttcgacgccgacaagacgggggccgcggtggacagcacggtg
tccgagccggagcagcagggtgcccccaccccgacgccggcgcacaccctgggtctgctg
cacctgtccggacagcagacgctggtgcagctgagtctgtcgcagggctccattgactac
gttggccccaccccagacaccttcacccagacccctttgattgtccccagctcgccgacg
ggacccgagagccagcgcggtgctgatgaagcgatggatacttccctgcccccaggagac
ggagagaaggtggaggaggaggagccgatggacacggaggctgcctctaagccacgccca
tccgcctctactcccgtctcccagaatcctccaggtttcgtgctggaccgaactctctct
ttgccctcccagccagagttctctcatgacgcgtttgtcccgactccgagccgggagacg
ccgacgccgagcgagacgccgtcccagtggccggagtcggctcctcccgctccgcctctg
cggctctccgccgacagcccccccgaggacgaggaggacagccaggccactcagatcgag
gagccggaggaggcgcccgcctgcgactccgcggctcctccccgcgcgggcgccggcgac
gacaacggcgtcgcgccggaggctcgaactgccgccgaggccgagtcgccgcggcgaccc
gatgtgcacgataagacgtctttgaacgtagaaacggcgaatgtaaaggaggcgagcccc
gcccacctggcgtcctgctcgcaactacggtcggattcctccgatctgaccgtcgacagc
tgtgtgcgggagacgccgcctgccgaccccgcccccccctgcgcccccccgacccccgcc
gggagggacggagggggaggagcaaagagtccgtccgttagagcgtcctcacagaagagc
gcagcgggcggcaacagtcaggaggtgtcagaggaggctgatgggcggggcgaagcggag
gaggaggaggaggtgatggaggagggtctgggaatggctttcgtcctctcccagagccag
ctgttgtcccctgagcccatggaggcggcggattgtggagaccgagcagaggacagcgtc
gtcgtggttacagacagcgtgagggactctcaggctcttcagaaagacgccgctccgccg
ccgaaggccagcagctccccgccggcctccaccaacggccatcagccccaggctcacgcg
ggggaggcccacgcggctcctgataggccgggggcggggccagacccagagggcctccga
gagaagagcctgagtgacagctccggagacctttcgttccacttcacccttcctaaagaa
ggggagctgattggtcccgtggtgggggccacgccccctctaatcagccagctgaagcag
accctgagacacagcactcccatcgagattacttccttctctgaaaagtccggcttgggg
ggcaacgggtcgatggcggcgagcaacatcgcgtcaggggagagcggcgacgaggcggcg
gagaagggagacgggaagctgagtctgaggatgaagctggtgacccctgtggaggagggc
agctcggagcgcttcagcctgcagaaaccagcgctgtcggatgaggatgaacccgtcgcc
atggttaccaccgttgctaacgctgtagccagcccgtcggtgttcactcgagtcaggcag
gtgcaccggcagcaggaggccagggaggacctccagggcgggggccacaccacacctgtg
agcagagggcagctgttcgcccccccacagcggagctcgccggcgtcctcgctgggatgc
aacagcctccccaacagccaatcggagcctccgccacaggaggcgtcgccacgggagacc
cgtaaggctcctcccaccaacgagccctctgagcacacacaagccccgcctccggaggcg
cccgcccccaacaaggcagacgcccggctgagggccgccgccgtgtccagcccgtccaag
ctgcgtcagcgaactgtctcccagcagaccagcttcgatgcaccggggcaacgctcccca
gccggcaggggagaaccagagtctccgtcctttagaagagccgcaggccccgcccaccgc
aggcacgtgcgcaccatccaggaagtgcgcaccaccgtcacgcgcgtcatcacggacgtt
tactatgacgacggcaaagaggtggagcgcaaagttacagaggagaacgaggagcccgtg
gtggactgccaggtgttggacagcgacatctcaccgtgccgcacgggcagctccatgacc
tccggtgaccttggcgacatcagctctctgtcgtccaaggcctccagcctgcagcacagc
tccgggggaaccagcagcagcggcttcacgcggccagacctcatcatgccgcccagccga
ggggccctcagtcccaggaggggaggcgggcagcaacagaggggtcacaggggtcacagg
gcagggtcagtggtcacagtgaaccgaggctacggcaccccggggtcccgggccctcgcc
ccgctgacccccagaggaagggctcggaggggccggcccccgtcccgctcctcgatgtcc
agggggggcgcagccggctcgctgccgaggcagccccactcctcctcggaggacgagccc
ttcgcccgcatgctccccccgcgcctccccctcagccccgcggaggcagagccccacgcg
cgctccgactccctccgctcgtccccggaggaggccggccggggggggggcggcggcagc
agcctggtgggcctgcgggtggtggccaagtggtcgtccaacggctacttctactcgggc
cgcattgtcagggacaccggcgaggggcggttccgcctgcggttcgacgacggctacgag
tgcgaggtggcggggagggacatcctgctgtgtgaccccatccccctggagacggaggtc
accgcgctgctggaggacgagtacttcagcatcggtgtggtgaggggccacaagacggag
gggcaggacctgttctacagcgtggagaaggacgcccagaggcagtggtacaaccggacg
gccatcatcttgtccctggagcagggcaacaagctgagggagcagcacagcctcgggccc
tacgagccctccaccccgctggccaaggcctccgacatcagcctcgacaacctggtggag
ggcaagaggcggcgcagaggaggagcccccgaggggcagaacactcccaaccgcggctcc
tccagcagcccccggacccccgggccctccggcaagaggaagctgctgagctccgaggag
agcaggtcgccggccaagagggggcgccgcggctcgggcgccagagccgcccagcgggtc
ggcgtgtgcaacacctcgggcagcggcaccgacctccccgccccctccggcgaggcggcg
gagacccacggcccgctgccccagaacaccaccctcttcatgggcttcgccttcatgctg
acggcctcctccgagatcgaccggctgaccaacaggcccggcagcgacgacgaggacgat
tacgtggagacgggtccgtacaacaaagcgtacacggagtcccagctgcaggcgggcgga
gggttcgtcctgcaggacttcaacgaggaacaatgtaaggcggcctaccagagcctgctc
attgctgaccagcactgccgcaccaggaagtacctgctgtgcctggccagcggcgtgccc
agcgtgtcgcacctgtgggtgagggactgctgcagagagaacaagctgctcaactaccgg
aactacctgctgccggccggcgtggggcccgacgaggcgctggtggagtggcatccgcgc
tgcagccccttcaaggccctgcgggtccttctggtgtttgagaagccggtggagctttgg
gcgcagctgatctccatgggcggaggctcctccgtccggcagttcccggcagacaaagac
tcctcagacatccccgccggcaggtatgaggtggtggtgacggacagcgcctgcccggcg
tgggtggagacggaggtgacgtcccaggacgtcccgctggtgtctccagagtggctcatc
cagagcgtcatccggggggagcgcctgggcttccacagcaagcctcagtatcgccatgac
tacgcctcctcgtcataa
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