Pungitius pungitius (ninespine stickleback): 119229442
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Entry
119229442 CDS
T07626
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119229442
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
119229442
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Gene cluster
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Oscp1
YabA
DUF5365
Motif
Other DBs
NCBI-GeneID:
119229442
NCBI-ProteinID:
XP_037345675
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Position
8:complement(14883644..14886514)
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AA seq
428 aa
AA seq
DB search
MERIPGAHPPPLSKLQVDPSDLQGMDFPMYVYKPRRGTKRGEESKETYKLPHRLIEKKRR
DRINECISQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKAITSLLEQQQQKILALQSGM
QIDQPAVNQEKSEEMFRSGFHICAKEMLQYLGNHETDGDFAPSHVINYIHKLAAEVLQGP
VRPGTPPSSQCEEIPAYHQHQPNKETPAGLAPKPSEGNGRNCVPVIQRAHAPIGSEQSGS
DTDTDSGYGGELEKTDSGAQQGRPDYYGHESQLKRALGERQSSGIKQEDEGPRQKRPRVE
SSEDEPPSGTESATSSSSSSYGSYMSVSPNRPTPPLPLCMPFYLLPPSAAAYLPMLEKCW
YPGAMPMLYPGLGGSAATMQSERPLPPQLVASPRGGSPPAAVAQTLMDSPALLQALKQVP
PLNQEAKD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaatcccaggcgcgcatccgcctcctctgtccaaactccaggtggatccgtcc
gacttgcaggggatggatttcccgatgtatgtttataaacccagacgaggaacgaagaga
ggagaggagagcaaggaaacctacaagctgcctcacagactcattgagaagaaaaggcgt
gaccggataaacgagtgtatctctcagctgaaagatttattaccagaacacctgaaactc
acgactctgggccatctggagaaggctgtggttttagagcttacactcaagcacgtgaaa
gccatcacctctcttctggagcagcagcagcagaagattcttgctctgcagagcggcatg
caaattgatcagcctgctgtcaaccaggagaagtcagaggagatgtttcgctctggcttt
cacatttgtgccaaggagatgcttcagtatctgggcaatcatgaaaccgatggagatttc
gcaccatcccacgtgatcaattacattcataagttagccgcagaggtgctgcaaggtccg
gtccgaccaggaactcctcccagctcacaatgtgaagaaatccccgcctaccaccagcac
caacctaacaaggagacgccggccggcttagcccctaaacccagcgagggcaacggcagg
aactgcgtgcccgtcatccagcgggcgcacgctccaatcggcagcgagcagagcggcagt
gatacggatacggacagcggctatggaggggagctggagaagactgattctggcgcgcaa
caggggcgcccagactactacggtcacgagagccagctgaagcgagcactgggcgaaagg
cagagctccggtatcaagcaggaggatgaggggcctcgccaaaaacggccccgggtggag
tcgtcagaggacgagccgccctcaggaacagaatcggcgacgtcatcgtcctccagcagt
tacggcagttacatgagcgtctcccccaaccgtccgactccacctcttcccctgtgcatg
ccgttctacctccttccaccttctgctgcggcctacctgccaatgctggagaaatgctgg
taccccggggccatgcccatgctctaccccggcttgggaggctccgcagccacgatgcag
agcgaaaggccgcttccacctcagctggtggcgtctccgaggggcggctcgcctcctgca
gccgttgctcagaccctcatggactcccctgctctccttcaggcgttaaagcaagtacca
cccctcaaccaggaagccaaagactga
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