Pungitius pungitius (ninespine stickleback): 119229468
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Entry
119229468 CDS
T07626
Symbol
cdh4
Name
(RefSeq) cadherin-4 isoform X3
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04514
Cell adhesion molecule (CAM) interaction
ppug04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119229468 (cdh4)
04519 Cadherin signaling
119229468 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119229468 (cdh4)
Cell adhesion molecules [BR:
ppug04515
]
Cadherins
Major cadherins
119229468 (cdh4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
F59B103_C
NCMAP
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
119229468
NCBI-ProteinID:
XP_037345721
LinkDB
All DBs
Position
8:complement(19619220..19763448)
Genome browser
AA seq
818 aa
AA seq
DB search
MVTARGFHDAHIWETTVKLALAGHPHPMALTKGGIEEMLSRAWDSQPRVIKFPRKHQRGS
SSNGLRRQKRDWVIPPINVPENSRGPFPHMLVRIRSDQDKAAGIRYSITGAGADQPPSGI
YNIDPISGNMFVTQPLDREERASFHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFQN
QVYNGSVAEGSKPGSSVMRVTATDSDDSTTANGMVRYRILSQTPHSPIPNMFTINSETGD
IVTVAAGLDREKVSQYTIIVQATDMEGNLNFGLSNTATALISITDINDNPPELTVRTFSG
EVLENKVNVVVTNLTVVDRDQPHSPNWNAVYRIVSGDPSGHFAIRTNPITNEGMLTVVKA
VDFEMNRAFMLTVLVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPVFPVNPKMIRFEEG
VPAGTTLTVFAAQDPDHFIHQIVRYSKLSDPANWLKINRTNGQITTMAVLDRESMYVRNN
VYEATFLAFDNGSPQASGTGTLQIYLIDVNDNAPVLMPRESQVCERARPNSRVNITASDA
DADPNVGPFVFELPSFPASVRRNWTISRLSGDYAQLRLRIPYLEAGVYEIPIIVSDSGNP
PLSNRSVIRVKVCPCDDNGDCSATGAVAAAGLGTGAIIAILICIIILLSMVLLFVVWMKR
REKERQAKPLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIISKPAGVRR
VDERPVIAESQYPVRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAG
SVSSLNSTSSGDQDYDYLNDWGPRFKKLADLYGGGDDD
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggtgacggcccgggggttccacgacgcacacatctgggagactaccgttaagctagca
ctggccggacaccctcacccgatggccctgacgaagggtggcattgaagaaatgctgtca
agagcctgggactcccaacccagagttatcaagtttcctcgaaaacatcagaggggctcc
tcttccaacgggctgaggcgacagaagagagactgggtcatcccccctatcaatgtgcct
gaaaactcccgaggacccttccctcacatgctcgtcagaatccgctcggatcaggacaag
gctgctggcatccgctacagcatcacgggagccggcgctgaccagcccccgagtggcatc
tacaacatagaccccatcagcggcaacatgttcgtcacccagcccctggaccgagaggag
agggcctccttccatctgcgagcccacgcggtcgacatgaacggcaaccaggtagagaat
ccaatcgatctgtacatctacgtgatcgacatgaacgacaacaggccagagtttcagaac
caggtgtacaacggctctgtggccgaagggtccaaaccaggctcgtcggtgatgcgggtg
acggccaccgactcggacgactccaccacggccaacggcatggtgcgctaccgcatcctg
tcccagacgccccacagccccatccccaacatgttcaccatcaacagcgagaccggagac
atagtgacggtggccgccggcctggacagggagaaagtgtcccagtataccatcattgtc
caggccactgacatggagggtaacttgaactttggcttgtccaacacagccacggccctc
atcagcatcaccgacatcaacgacaatcccccagagctgacagtcagaacgttttcaggg
gaggtgctggagaacaaggtgaatgtggtggtgaccaacctgacggtggtggacagggat
caaccccacagccccaactggaacgctgtctaccgcatcgtcagcggagacccttccgga
cacttcgccatccgcaccaaccccatcaccaacgagggcatgctgaccgtggtcaaggcg
gtggatttcgagatgaatcgggccttcatgctgaccgtgctggtctccaaccaggcccac
ctggccagtggcatccagtcctcgctccaatccacagcgggggtcaccatttcggttcag
gatgtgaacgagccgcccgtcttccctgtcaaccccaagatgatccgcttcgaggagggt
gtgcctgcagggaccacgctcaccgtgtttgctgctcaggaccccgaccacttcatccat
cagattgtccggtactccaagctgtcagacccagctaactggctgaagatcaacaggacc
aatggtcagatcaccaccatggccgtgctggaccgggagtccatgtacgtcagaaacaac
gtgtacgaggccacgttcctggccttcgacaatggctcgcctcaggccagcgggacgggg
accctccagatctacctgattgacgtcaacgacaacgcgccggtgctgatgcccagggag
tcccaggtgtgcgagcgcgcgcgccccaactccagggtcaacatcaccgcctcggacgcc
gacgccgaccccaacgtggggccgtttgtcttcgagctgccttctttccccgccagcgtc
cgccgcaactggaccatctcccgactcagcggggactacgcgcagctgaggctgaggatc
ccctacctggaggccggcgtgtacgagatccccatcatcgtgtccgattccgggaaccct
cctctgtccaaccgctccgtgatcagagtcaaagtctgtccttgcgacgacaacggagac
tgcagcgccaccggggccgtggccgccgccggcctcggcaccggggccatcatcgccatc
ctcatctgcatcatcatactgctgagcatggtcctgctgtttgtggtgtggatgaagcgc
agagagaaggagcggcaggcgaagcctctgctgatcgaccccgaagatgacgtcagagac
aacatcctcaagtatgacgaggagggcggaggagaggaggaccaggactacgacctgagc
cagctgcagcagcccgagtccttggaccacatcatcagcaagccggcgggggtccgcagg
gtggacgagagacctgtgattgccgagtcacagtaccccgtcagacccagcctgccccac
cccggagacataggagacttcattaacgatggcctgagggcagcagacaatgaccccacg
gcccccccctacgactccctgctggtgttcgactacgagggcagcggttcgaccgccggc
tccgtcagctctctgaactccaccagctcaggggaccaggactacgactacctcaacgac
tggggcccccgcttcaagaagctggccgatctctacgggggaggggacgacgactga
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