Pungitius pungitius (ninespine stickleback): 119229645
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Entry
119229645 CDS
T07626
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ppug00535
]
119229645 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ppug00537
]
119229645 (gpc6a)
Proteoglycans [BR:
ppug00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
119229645 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ppug00537
]
Others
119229645 (gpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
DUF5856
Serglycin
SpoIVA_C
Motif
Other DBs
NCBI-GeneID:
119229645
NCBI-ProteinID:
XP_037346117
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Position
4:complement(10264866..10362291)
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AA seq
570 aa
AA seq
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MNAMWRLHAAVCMTLSLLSLSSAADSKARSCGEARHAYHARGFSLANVPHQEISGEHLRV
CPQGHTCCTSEMEDKLNQESKVEFENLVEESSRHMRTTFFSRHKKFDEFFLELLDNSEKS
LNSMFTRTYGKLYMQNAEVFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQ
YHFTDDYLECVSKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLMVGREVANRVAKVN
VIPACVRALTKMLYCPYCRSMPGLKPCHNYCHNVMRGCLANQADLDAEWNLFIDAMLLVA
ERLEGPFNIEAVVEPVDIKISEAITTMKDNSMQVSAKVFQGCGQPKASGIGRSARGISDV
FSARFRPYTPEERPTTAAGTSLDRLRVVWRTMQHSLIDIKEKLKESKRFWSNLPDDICAK
GKFTESDEDQCWNSHTKGRYFPEVVKEGLTNQVNNPEVEVDITRPDTLIRQQIMALRVMT
NKLKNAYNGNDIYFQDSSDEGSTSGSGSGCSSGCTTEYVFVGTEASVIGADRSDERAAAA
AGKSCSVGPSLLLLMAALTLSLRAMQTQWR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgatgtggaggctgcacgccgccgtatgtatgactctgtcgctgctgtccctg
tcatccgctgccgacagcaaggcgcggagctgtggcgaggcaaggcacgcgtatcacgcc
agaggattcagcctcgccaatgtgcctcatcaggaaatatcaggtgagcacctgcgtgtc
tgtccacagggacacacctgctgcacatccgagatggaggacaaactcaaccaggagagc
aaagtggagtttgagaacttggtcgaggaaagcagccgccatatgaggacaacttttttt
tcgagacataaaaagtttgacgagtttttcctggagctgctggacaattctgagaagtct
ctcaacagtatgttcacaaggacctacgggaagctgtacatgcagaacgcagaggtgttc
caggacctgttcaccgagctgaagcgctactacacagggggcaacgtcaacctggaggag
atgctcaatgacttctggtccaggctgctggagcgcatgttccagttactcaactcccag
taccacttcacagacgactacttggagtgcgtcagtaaatacacagatcagctcaagcct
tttggagatgtgcccaggaaacttaaggcccaggttaccagggccttcatcgctgcccga
accttcgtccaggggctgatggtgggtcgggaggttgccaacagagtggccaaggtgaat
gtaatcccagcatgtgtcagagcgttgaccaagatgctgtactgtccatactgtcgcagc
atgccagggctgaagccctgccacaactactgtcacaacgtcatgaggggctgtttagca
aaccaggcggacctcgatgccgaatggaacctcttcatcgatgctatgttactggtggca
gagaggctggagggacccttcaacattgaagcagttgtagagccagttgacatcaagatt
tctgaggccatcacgaccatgaaggacaacagcatgcaagtgtcagccaaggttttccaa
gggtgtggccagccgaaggcatcgggaataggccggtctgcacgcggcatctcagatgtg
ttcagtgcccgcttcagaccgtacacccctgaagagaggccaacaacagcagcaggaaca
agcctggatagattgagggttgtgtggaggacaatgcaacacagtttgattgacatcaaa
gagaagttgaaagagtccaagaggttctggtccaacctgccggatgacatctgtgccaag
ggcaagttcacagagtctgacgaggatcagtgctggaacagtcacacaaagggcagatat
ttccctgaagtggtgaaggagggtcttaccaaccaggtgaacaacccggaggtggaggtg
gacatcaccaggcccgacacactgatacgacagcagatcatggcgctacgtgtcatgacc
aacaaactaaagaatgcttacaatggaaacgacatctacttccaggactcaagtgacgag
ggcagcacttctggtagtggcagcggctgctctagcggctgcacaacagagtacgttttt
gtgggaacagaagcttctgtgatcggagccgacagaagtgatgaacgagcagcagcagcc
gcaggcaagtcgtgttctgtcggaccctcccttctgctgttgatggcggcccttacactc
tctctccgggcaatgcagactcaatggagataa
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