Pungitius pungitius (ninespine stickleback): 119229681
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Entry
119229681 CDS
T07626
Symbol
stab1
Name
(RefSeq) stabilin-1
KO
K19020
stabilin-1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119229681 (stab1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ppug00536
]
119229681 (stab1)
Glycosaminoglycan binding proteins [BR:
ppug00536
]
Hyaluronan
Cell surface receptors
119229681 (stab1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
EGF_STAB1-2
Xlink
EGF
EGF_Teneurin
cEGF
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
119229681
NCBI-ProteinID:
XP_037346204
LinkDB
All DBs
Position
8:2897528..2930983
Genome browser
AA seq
2548 aa
AA seq
DB search
MLPLLLLLCLQTSQQEQTLPPGRCDISQRLDVYTSCSSCAAINRCPQHFSSAGTTNCSYV
VQIGGRDVVLDGCQHICMKGFMQPQCCPQHWGPLCLSCPSWSGKTCSFHGTCVDGDLGNG
TCVCDDGFSGFACQECRDQNRFGEKCDKECDCVHGACSNGPEGDGQCLCQPPYTGKRCDQ
VSTRCSSCSPYSYCKGDADAAGCECLPGYKKTSTGKCASICSARDCDANAQCSSQGSRVT
CACKPDYQGDGRVCVPRNPCSENNGGCPVNSTVCVFKGPNKSQCQCMFGMSPVGGSAAFG
CELVSACSEDTCDPTAECLTETDGQHRCVCEAGQIGDGHRCYGNLMERLMELDRSGSQRE
NLTGSVAMFAKGCSPLLSHAGPFTAFVPVMKTPLSGVNEEQMCKNHLILGQHILRDLEGR
DFNLVGGAKWRSKGNKRFILMDNPSRPYAVIQEDLPAANGIIHVIDRPITSTRSDRSNRD
EQFADKTIREILTMDPKFNRFLSLVDNCGSPPPFRGPGPLTVFVPTNGAVDKARDGSILY
MLHEAKYKLQELLRHHVFSHAVLTVDELAALPQIQTMANQIVSISVSNDGEILLGEKGVR
LVSTNIVASNGIIHMIDGLLYPPSILPILPHRCDVIDNKIITGPCVQCSYLYDTKCPDGT
TEMDRHQIGCDYVTSPLRPTLSRGCAKFCNATKKVPQCCKGFYGPDCKPCFGGFQHPCYD
KGTCFDGIHGNGSCSCQPGLKGVACHICVDPSKHGDNCDEVCRCVHGVCDNRPGSGGVCR
RGSCKGGFSGENCDKTATPCNSDGLQEHCHMHAYCTHSGLQTTCLCRDGYEGDGHSCSPV
NPCLKSGRGGCHVNAECVYVAPGNASCVCMEGWTGDGGVCVEINNCQLEGRGGCSPNAVC
NHIGPGQSECVCKTGYMGDGIACDLINPCTKKNGGCHELAKCELSEGAGTHTCTCPEGYA
GDGTICFGTILEELDMNFNLYLFYRLTQVYSTLSPDLSGNLTVFVPSNKAVANMTSATDK
FWNGRHHLPHLLRAHVLPGIYSVEDLVSMVGRKLTTLDPSTSWEVSNSSGVIRIGTSSIV
TPNLPALNGYIHVIDQVLTPSRLGLPPEPPTLMAFLNSSSTFTLFAKHALMYNLSADLGE
LDFTLLLPTDEAIRQHLSTTNSSLLDSDVLKYHVIPKELLFPDHLSDGVLKSTLLGADYQ
VQFHLNHNNQTAVNDVPLDGAMTETQRGVVLVLPQVLQIHRNRCSQEVHLQVPGRCSDCE
GPPRCHFSHKPIKNQYPENMKSNCKYRKRVGSRRKSMPGCLIKCLQLTTDHSCCPGYYGH
ECFKCPGGIGSWCSNHGECQDGSLGNGECRCFEGFHGTACEDCEPGRYGATCSSKCACDH
GKCEDGLAGSGRCECYKGWKGASCSIEIKDDACGGRCDENANCVTGPKGSAAACVCVAGY
EGNGTYCNELDLCSRSNGGCSEFAVCLRVSAGERTCTCGEGYTGDGVICLEIDGCLVKNG
GCHQSADCTRTGPNTTACTCRMGFQGSGRFCYPANPCNKKNGGCSPHARCEYLGQGRRNC
TCLRGHVGDGLDCRGSTNNELFRQPENIFLRRMVSKSNARVFYGDGPFTTFVPLEETNRN
FSFEEWDQSGRLAELVRYHIVSCETLTLSDLKTTKAVVATSGHTLHFSLREGSVWVNNMT
RIVRSDYITSNGVIHHVDALLTPYKLQDKRRLKADSMNYTSAAAFYGYSQFYKLVEDTGL
IPVLQMSIHQPFTMFWPTDEALDSLPAERKHWLSSPDHQEEAAALVKAHIIRNSRMLSIG
QPDKASTLRTMHGSTLKYSCDRTLVGAVLINGNEAKVVERYMNFKEGVAYGIDQLLEPPG
LGAFCDSPENTTTSGRCGRCLFAPSCPFRHLDTGKTQICFNRFPSFGRRYPHWDFMNDRT
TSMGCKRICQFSSWVQKCCKNHYGRDCQVCPGGLEAPCGNHGDCDDGMKGSGRCRCHEGF
VGEACNRCTVRHYGPNCTACDCGRMGSCDGGMEGSGKCVCVPGWEGERCQIDSGSIPQEC
RGCHAQADCVPGSGCRCKSGFQGNGTFCDPEPPPDLCSEYNGGCHQNADCNQTGLLVNCT
CRLGYQGDGYSCNPINRCIVEQNGGCSDFASCKFTGPNERLCECLPGYVGNGVQCLEKVV
PPVDRCLEDNGGCDPAADCKDLHYRANTAGVFHLRSPDGKYQMNFSQADAACRAEGASLA
TFRQLGDAQQLGMHLCVAGWMEGGKVGYPTRFPSVRCGDNHVGLVVYKEPVDQSSKYDAY
CYRLKDVSCECPAGYIGNGDFCNGVLTSVLASYSNFSIFYKCLLDYSSSSSEGKQLVDFM
SHRKSELTVFVPHNAGFGANQTLSSRDLEYHVSTNHSVRPFKELGHQEVIVSRLGFDLTV
THGNNESIKMVNRQVLLEWDILAVNGIIHVIAGPLTAPPPPISHHASQAHAHSSATVSAI
LVSVLLACILAALGYYVFKHKTDAFRFHYFKDEDEDGSPGGSKKPTLVSIPNPLYSGSRA
FSEPFGEADQGLEPAEPEEPPKILDLDE
NT seq
7647 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgctgctgctgctgctctgcctgcaaacatcacagcaagaacagactcttcct
cctggacggtgtgacatctcacagaggttggacgtgtacacctcctgctcctcttgtgcc
gccatcaacaggtgcccccagcacttcagcagcgcgggcaccaccaactgcagctacgtg
gtgcagatcggcggcagggatgtggtgttggatggatgtcaacacatctgtatgaagggg
ttcatgcagccacaatgctgcccacagcactggggacctctttgtctctcttgtcccagc
tggtcggggaagacctgcagcttccatggaacctgtgtggacggagacctcggcaacggg
acctgcgtctgtgacgatggcttctctggcttcgcctgtcaggagtgcagagatcagaac
agatttggagaaaaatgcgataaagagtgtgactgtgtacacggggcgtgcagtaacggt
ccagaaggtgatggacagtgtttgtgtcaaccgccctacaccgggaagcgctgtgaccaa
gtgagcaccaggtgcagcagctgcagcccgtactcgtactgcaaaggagacgcagacgcc
gccggctgtgaatgtttgcccggctacaagaagacgtccaccggcaaatgcgcaagtatc
tgctcagcgagggattgcgacgcaaacgcccagtgctcctcacaggggtcaagggtcacc
tgcgcctgcaagccggactaccagggcgacggcagggtctgcgtgcccaggaacccttgc
tccgagaacaacggcgggtgtcccgtcaactccaccgtctgtgtcttcaaaggacccaac
aagtcgcagtgccagtgcatgttcggcatgtcccccgtcgggggcagcgccgcgttcggc
tgcgagctggtctccgcctgctcagaggacacctgcgaccccacagccgagtgtctcacc
gaaacggacgggcaacacaggtgtgtgtgtgaggcgggtcagattggtgacggacaccgt
tgctatggcaacctgatggagcggctgatggagctggacaggagtggaagccagagggaa
aatctgaccggatccgtcgccatgtttgcgaaaggctgttcgccgctgctgagccacgcg
gggcccttcacagccttcgtccccgtgatgaagacccctctgagtggcgtcaacgaggag
cagatgtgtaaaaaccacctgatcctgggtcagcacatcctcagggatctggagggccga
gacttcaacctggtcggaggagccaagtggagaagcaaaggcaacaagaggttcatcctg
atggataaccccagcaggccctacgccgtcatccaggaagacctgccagcggccaacggg
atcatccacgtcatcgaccggccaatcacaagcacccgctcggacaggtctaaccgggac
gaacagtttgccgataagacgatcagagagattctgaccatggatccgaaattcaaccgc
ttcctgtcgctggtggataactgcgggtcgccgccccccttccggggtcccggtcccctg
acggtgttcgtccccaccaacggggctgtggacaaagccagagacggcagcatcctgtac
atgctgcacgaagccaaatataaacttcaggaacttctgagacaccacgttttctcccat
gctgtgctgacggtggacgaattagctgctctcccgcagatccagacgatggccaatcag
attgtctccatcagtgtgtccaatgatggtgagatcctacttggtgaaaagggcgtccgt
ctggtgagcaccaacatcgtggcgtccaacgggatcatccacatgattgacgggcttctg
tacccgccctccatccttcccatcctgccgcaccggtgtgatgtcatcgacaacaaaatc
atcacggggccgtgtgttcaatgcagttacctctatgacactaaatgtccagacggcacc
actgaaatggacagacatcagatcggctgtgactacgtcacgtctcccctcaggcccacg
ctcagtcgaggctgcgccaaattctgcaacgcaaccaagaaggtaccacagtgctgtaaa
ggcttctatggtccggactgcaaaccctgtttcggaggattccagcatccctgctacgac
aaaggaacgtgttttgacgggatccatggcaacggctcgtgcagctgtcagccaggcctc
aagggggtcgcctgccacatctgtgtggatccatccaagcacggtgacaactgtgatgaa
gtgtgtcgctgcgtccacggtgtgtgtgacaaccgtccaggcagcggcggtgtgtgtcgg
agaggatcctgcaagggaggattctccggggaaaactgtgacaagacggccacgccgtgc
aactcggacgggctgcaggagcactgccacatgcacgcgtactgcacgcacagcgggctg
caaaccacgtgtttgtgtcgagatggatacgagggggacggtcactcctgttctcccgtc
aacccctgcctgaagagcggccggggaggctgccacgtcaacgcggagtgtgtgtacgtg
gctcccggtaacgcctcgtgtgtgtgcatggagggttggaccggcgatggcggagtgtgc
gtggagatcaacaactgccagctggaggggagaggaggctgcagccccaacgccgtctgc
aaccacatcggacccggacagagtgagtgcgtttgtaagacaggctacatgggggacggt
attgcgtgtgacctcattaacccgtgcaccaagaagaacggaggctgccatgaactggca
aagtgtgagctctctgagggagccgggacgcacacctgtacctgtcccgagggctacgcc
ggagacgggaccatctgcttcgggacgatactggaggagctggacatgaacttcaacctg
tacctgttctaccgactcactcaggtgtacagtaccctctctcctgacctgagtgggaac
ctcacggtgtttgtcccgtccaataaagctgtggcgaacatgacgtcagccacggacaag
ttctggaacggcagacaccacctgcctcacctcctgcgagcccacgtcctaccggggatc
tactccgtggaagacctggtctcaatggtgggccgcaagctgaccaccctggacccctcg
acctcctgggaggtcagcaacagcagcggggtgatccgcattgggacctcgtccatcgtc
acacccaacctgcctgcgctcaatggctacatccacgtcatcgaccaggttttgactcca
tcgcgcttaggcctcccccccgagccccccaccctgatggccttcctcaactcctcctcc
accttcactctgtttgcaaagcacgctctgatgtacaatctgtcagctgatctgggcgag
ttggatttcacgctcctgctgccaacagacgaggccatcaggcagcacctcagcacgact
aactcctccctcctggactccgatgtgttaaagtaccacgtgatccccaaggagctgctc
ttccccgaccacctgtccgacggcgtgctgaagagcacgctgctgggcgccgactaccag
gtccagttccacttgaaccacaacaaccagacggcggtgaacgacgttcccctcgacggc
gccatgaccgagacgcagcgcggcgtcgtcctcgtcctcccgcaggtcctgcagatccac
cgcaacagatgcagccaggaggtccacctgcaggtcccaggaagatgctcagactgtgag
ggaccacctcgatgccatttcagccacaaaccaatcaaaaaccagtatccagaaaacatg
aaatccaactgtaaatacaggaagcgagtcggatcccgcaggaagtcgatgccgggctgt
ctcataaaatgtcttcagttaaccacggatcactcctgttgccccggttactacggccac
gagtgcttcaaatgcccgggaggcatcggcagctggtgctccaatcacggggagtgtcag
gacggtagccttggcaacggggagtgccgctgcttcgagggcttccacggcaccgcgtgc
gaggactgtgagccaggacgatacggagccacctgctcctccaagtgtgcgtgtgaccac
gggaagtgtgaggacggtctggcaggaagtggcaggtgtgagtgttacaaaggatggaaa
ggagcttcctgctcaatagagatcaaggacgacgcctgtggaggcagatgtgacgagaac
gccaactgcgtaacggggccgaagggttcagccgctgcctgtgtgtgtgtggctggatac
gaaggaaacggaacttactgcaatgagctggatttgtgcagcaggtccaacggcgggtgt
tcagaatttgctgtttgcctgagggtctctgcaggagagaggacctgtacctgtggagag
gggtacactggagacggggtgatctgcctggagatcgacggatgtctggttaaaaatgga
ggctgccaccagtcagccgattgcacccgaacaggccccaacacgacggcctgcacttgt
cggatgggctttcagggctcggggaggttctgttaccccgccaacccgtgcaacaaaaaa
aacggcggctgcagccctcacgctcgctgcgagtacctgggtcagggtcggaggaactgc
acctgcctccgaggccacgtgggcgacggcttggactgccggggaagcaccaacaacgag
ttgttccgccaaccagagaatatcttcctccgtcgaatggtgtcgaaatccaacgctcgt
gttttttatggcgatggaccgttcacgaccttcgttcccctggaggaaacaaacaggaac
ttctcttttgaggaatgggaccaatctggtcgtcttgctgaactggttcgttaccacatc
gtttcctgcgagactttgaccttgagtgacctcaaaacaaccaaagccgtcgtcgccaca
tcaggacacacattgcacttcagcctgcgggagggttcggtctgggtcaacaacatgacg
aggatcgtaaggagtgattacatcacttctaacggcgtcattcaccacgtggacgcgctg
ctgacgccctacaagctgcaggacaaacggaggctgaaggctgactcgatgaactatacg
tcagcagctgccttttatggctacagccaattctacaaactcgttgaggacacagggttg
attccggtgctgcagatgtccatccatcagcccttcaccatgttctggcccacagacgag
gccctcgactcgctgccggctgaaagaaagcactggctctccagccccgaccaccaggag
gaagcagccgcgctggtgaaggctcacattatacgcaactccaggatgctgagtatcggt
cagccggacaaagcctcgacgctccgcaccatgcacggatccaccttgaagtacagctgc
gaccggaccctggtgggggctgttttgattaacggcaatgaagccaaggtggtggagcga
tacatgaacttcaaggagggcgtggcctatggcatcgaccagctcctggaaccaccgggc
ctgggagcgttctgcgacagcccggagaacacgaccaccagcggtcgctgtggacgctgc
ctctttgccccttcctgtcccttcagacaccttgacacgggaaagacgcagatttgtttt
aacaggtttccctcgtttgggcgccgctacccacattgggacttcatgaatgatcgtacc
acatcgatgggctgtaagagaatatgtcagttttcttcctgggtccagaagtgctgcaaa
aaccactacggtcgagactgtcaagtgtgtccaggtggcctggaggccccatgcggtaac
catggtgactgcgacgatggaatgaagggttcaggtcgctgtcggtgccacgagggcttc
gtaggcgaagcctgcaaccggtgcacagtcagacactatggacccaactgcacagcctgt
gactgcgggcggatgggaagctgtgacggaggcatggaaggttctggaaagtgcgtgtgt
gtcccgggctgggagggggagcgctgccagattgattcaggctccatcccgcaggagtgc
cgggggtgccacgctcaggccgactgtgtgccaggctccggttgtcggtgcaaatccggc
tttcaggggaacggcaccttctgcgacccggagccacctccagacctctgctccgaatac
aacggcggctgtcaccaaaacgcagactgcaaccagacggggctgctcgtcaactgcacc
tgtcgccttggttaccaaggagacggctactcctgcaaccccatcaacaggtgtattgtg
gagcagaatggcggctgcagtgacttcgcatcctgcaagttcactggtccaaacgagcga
ctgtgcgagtgcctgccggggtacgtgggaaatggagtccagtgtcttgagaaggtggtt
ccccccgttgaccgctgcctggaagacaacggaggctgcgaccccgcggccgactgcaag
gacctgcattaccgcgccaacacggcaggagtcttccacctgcgctctccagacgggaag
taccagatgaacttcagtcaggccgacgccgcctgccgggccgagggcgcctcgctggcc
accttcagacagctgggagacgcgcagcagctggggatgcacctgtgcgtggccggctgg
atggagggcgggaaggtggggtacccgacccgcttcccctccgtcaggtgcggagacaac
cacgtgggcctggtcgtctacaaggaaccggtggaccagagcagcaagtacgacgcctac
tgctaccggctcaaagatgtttcctgcgagtgtcccgccggttacattggaaacggagat
ttctgtaacggcgtgctgaccagcgtcctcgcctcctacagcaacttctccatcttttac
aagtgtttgctggactacagcagctcgtcctcagaaggaaaacagctggtcgactttatg
tctcacaggaagtccgagctcacggtgtttgttcctcacaacgccggcttcggtgcaaac
cagactctgtctagtagagatcttgagtatcacgtctcaaccaatcacagcgttcgacca
ttcaaggagctgggacaccaggaggtcatcgtatcgaggcttgggttcgatctgaccgtt
acccacggcaacaacgagagcattaagatggtgaaccgccaggtgctgctagagtgggac
attcttgctgtaaacgggatcatccacgtcattgcgggcccgctgaccgcgccccccccg
ccgatctcccatcatgcatcacaagcccacgcccactcgagcgcaacagtgtcggccatc
ttggtgtcagtgctgctggcgtgcatattggccgccctcggctactacgtcttcaaacac
aagacggacgccttccgcttccactacttcaaggacgaggacgaggacggctcgccgggc
ggcagcaagaagcccacgttggtctccatcccgaaccctctgtacagcggctccagagcc
ttcagcgagccgtttggggaggccgaccaggggcttgaaccagcagaacctgaagagcct
ccaaagattctggacctggacgagtag
DBGET
integrated database retrieval system
