Pungitius pungitius (ninespine stickleback): 119229727
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Entry
119229727 CDS
T07626
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119229727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119229727
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119229727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
PHM7_cyt
Nup35_RRM_2
NID
Motif
Other DBs
NCBI-GeneID:
119229727
NCBI-ProteinID:
XP_037346290
LinkDB
All DBs
Position
8:17758283..17778755
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AA seq
359 aa
AA seq
DB search
METEGSQSSLSSDNSPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRS
RGFGFVTYAEQAGVEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE
CKKAQPKEVMTPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTTTYTSRSYSGIAPGYT
YQFPEFHLERTPLLTSSHPAELAAIPLTAYGPMAAAAAAAVVRGSTPSRTAGFLGTSSPG
PMAELYAAANQDSGVNSYISAASPAPSSGFAHGLGKVYPLLSVYPQGPLIATAFTNGYH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaagggagccagagcagcctgtcctccgacaactccccccacgacccctgc
aaaatgttcatcgggggtctgagttggcagacgacacaagagggcttgaaggagtacttc
tgtaaattcggcgaggtgaaggagtgtatggtgatgcgggatcccgttaccaagcggtcg
agggggtttgggtttgtaacgtacgcggagcaggccggcgtggagaaggttttggcgcaa
aacagacacgagctggattccaaaacgatcgacccgaaggtggcgtttccccgccgggct
cagcctaagctggtgaccaggacaaagaagatctttgtcggcggactgtcagtcaatacc
accatcgaagatgtgaagcattacttcgaccagtttggaaaggtcgatgacgccatgctt
atgtttgacaaaacaaccaacagacacagaggcttcggcttcgtcacctttgagaatgaa
gacgtggtggagaaagtgtgtgagatccacttccatgagatcaacaacaaaatggtggag
tgtaagaaagcccagcccaaggaggtgatgacgccgacaggttcagccagaggccgctcc
agagtgatgccctatgggatggatgccttcatgctgggcatcgggatgctgggttatcca
ggtttccagactactacctacactagccgcagttactctggaatcgctcctggttacact
tatcaattcccagagttccatttagagaggacccccctcctgacatcatcccaccccgct
gagctggcagccattcccctgactgcttatggaccaatggcagctgctgctgcagccgca
gtagttagaggctccaccccttcacgcacagctggtttcctgggcaccagcagccctgga
ccaatggctgaactgtatgctgcagccaaccaggactcaggagtcaacagctacatcagc
gccgctagccccgcccccagctcagggtttgctcacggtctagggaaagtctacccgctg
ttgtccgtgtatccccagggcccgctgattgctactgcgttcactaatggctaccactga
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