Pungitius pungitius (ninespine stickleback): 119229766
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Entry
119229766 CDS
T07626
Name
(RefSeq) contactin-4
KO
K06761
contactin 3/4/5/6
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119229766
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ppug00537
]
119229766
Cell adhesion molecules [BR:
ppug04515
]
Immunoglobulin superfamily
Contactins
119229766
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ppug00537
]
Others
119229766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_6
Pur_ac_phosph_N
Ig_4
Izumo-Ig
Tissue_fac
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
119229766
NCBI-ProteinID:
XP_037346353
LinkDB
All DBs
Position
8:complement(12175319..12244185)
Genome browser
AA seq
1024 aa
AA seq
DB search
MKMLLPWELLILLSLKECLAENARHGPVFTQEPSDSVFPLSTDDKQVFINCRAKGNPPPH
YRWKMDGGEINTQSDPNYSLVEGNLLINNPHVINHGGVYQCIATNTFGTVVSREAKVQFA
FLQNFSRKSRNTVSVREGQAVVLLCGPPPHYGEIKYWWFFDGQRGFLQQDARRFISQRTG
NLYIAKVEASDAGNYTCAVRNVMTNATVLSSPTPVVVRRDAVMGEYEPKIEVQFPDTLRV
SKGTSVKLECFALGNPVPSISWRRGDGNPLPGKIKVNHSSGVLEIPYFRPEDAGVYECVA
ANSKGQNVARGQLIFNNAEHLHWVQTLKDAHMAIDANLQWECKAMGKPRPTYKWLKNGQP
LATQGRIHVEASRLTISKISLSDSGMYQCVAESEHSAVYASAELKVVASPPNFARRPVKT
STVVQRGGEVVLECRPHASPMATVSWWRGGELLKDSERQIVMEDGTLRITNISRSDGGRY
TCLARNSFGTSSSTGTLLVKEPTKIVVPPLSLDGAVGQSIVLPCQVSSDSSLIPIFKWFF
NGKPIDVSRQEHFEMIGGGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAADLIVRGPP
GAPEGLAVSDITETTVQLSWVSGPDNHSPITMYVVQARTPFSIGWQTVRTVPDSVPGQMI
HATVTDLNPWVDYEFRVVAINGVGVGEPGTPSKQIQTRAAAPKVAPVGVSGGGGVRGELV
ITWEPVAEEQQSGEGFGYVVAFRPPASGTWIQTVLASPDASRYVYRNESIAPLSQFEVKV
GVYNSMGEGPFSHAVTVFSAEEEPSEAPSRVWARALSASVIQVDWEPIPSGSGSGKILAY
EVLFWEEGSEQSEAESLRVADTTALLSGLKGSTAYGISVRAQNSAGLGPCSPAFNYTTKK
PPPRQPPGNIEWNLTNSKIFLNWEHVKAAENESEVTGYKVLYRPNWPGRTTSLETNKTSA
ELRIPSGEDYLIEIKALSDGGEGTSSGPIRIPKMSSLNSEGCRCPGSTRIIPFVMFFCSF
LFIL
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctgttgccatgggaactgttaatccttctgtcactcaaagagtgccttgct
gagaatgcgcgccacggtcccgtcttcacccaggagcctagcgacagcgtctttcccttg
agcaccgatgataagcaggtgtttattaattgcagagcaaagggcaacccacctcctcat
tataggtggaaaatggatgggggagaaataaacacacagtccgatcctaactacagcctg
gtggaggggaacctgttgatcaataatccacatgtcatcaatcatggaggagtgtaccag
tgcatagccaccaacacttttgggaccgtagtcagcagagaggcaaaagtccagtttgct
tttctgcagaacttcagcagaaagtcgaggaacacagtgtcggtgagggagggccaagcc
gtggttctactctgcggccccccaccccattacggagagatcaaatattggtggtttttc
gacggacagcgcggcttcctgcagcaggacgcccgccgcttcatttctcagaggacgggc
aacttgtacatcgccaaggtggaagcctcggatgccgggaactacacgtgtgcggtgaga
aacgtgatgaccaacgccacagttctcagctctccgacccccgtggtggtgcgcagagac
gcggtgatgggtgaatatgagccaaagatcgaggtccagtttcctgacaccctcagggtc
tccaagggaacttcggtgaagctggaatgcttcgccttgggaaaccctgtgccttccatc
tcctggaggagaggcgatggaaacccactcccgggcaagattaaggtcaaccactccagc
ggggttctggaaatcccgtactttcgcccggaggacgccggcgtctacgaatgcgtggcc
gcgaacagcaaggggcaaaacgtcgccagagggcagctcatattcaacaatgctgaacat
ctgcactgggtccagaccctaaaggatgctcacatggccatcgatgctaatctgcagtgg
gaatgtaaagccatgggtaagcctaggcccacatacaaatggctgaagaacggccagccg
ctagcgacacagggcaggatccacgtggaggcgagtagactgaccatctccaagatcagt
ctgtcggactccgggatgtaccagtgcgtggcggagagcgaacacagcgccgtgtacgct
agcgctgagctcaaggttgtcgcgtcaccgcccaacttcgcccggcggcccgtgaagacg
tccaccgtggtccagagggggggcgaggtggtgttggagtgccgcccgcacgcctccccc
atggccaccgtctcctggtggagagggggagagctcctgaaggacagcgagagacagatc
gtcatggaggacggcacgctgcgtatcaccaacatctccaggtcggacgggggcaggtac
acgtgcttggccaggaactcctttggaacatccagcagcacggggacgctgctggttaaa
gagccaactaagatcgtggtcccacccttgagtttggacggcgccgtgggtcagagcatc
gtgctgccctgccaggtgtccagtgattcctccctgattcccatcttcaagtggttcttc
aacgggaaacccattgatgtcagcaggcaggagcactttgagatgatcggggggggattt
gcaggtgacctgatggtgaggaacatccagctaaagcattctgggaagtacgtgtgcatg
gtgcacaccgaagtggacacagtctcagcagcggcagacttaattgtcagaggacccccc
ggcgccccggagggcctggcggtgagcgacatcaccgagaccactgtgcagctttcctgg
gtctccggaccggacaatcacagtcccattaccatgtacgtggtccaggccaggaccccc
ttctctatcggctggcagaccgtgaggacagttcctgattctgtgcctggacagatgatt
catgcaacagtgacagatttgaacccctgggtggattacgaattcagggtggtggcaatc
aacggcgttggcgtgggagagccaggcacgccatcaaaacagattcaaacccgagcagca
gctcccaaggtggcgccggtcggtgtgagcggcggcggaggagttcggggggaactcgtc
atcacgtgggagcccgtcgcagaggagcagcagagcggggagggctttggctacgtcgtg
gctttccgtccacctgccagcggcacctggatccagacggtcctggcctcgccggacgcg
tcgcgatatgtttacaggaacgagagcatcgcacccctgtcccagtttgaggtgaaagtg
ggagtttacaacagcatgggagagggtccgttcagccacgccgtcacagtgttctctgca
gaggaagaaccctctgaggcgccttcgagagtttgggcccgcgctctgtcagcctctgtg
atccaggtggactgggaaccaatccccagcggctcgggcagcgggaagatccttgcgtac
gaggttctcttttgggaggaagggtctgaacagagcgaggcggagagcttgagggttgcg
gacaccacggctctgctgtctggcctgaagggcagcacggcatacgggatctcagtcaga
gcccagaacagcgctggacttggaccctgcagccctgctttcaactacacaaccaagaaa
ccacctccgaggcagcctccggggaatatcgagtggaacctgaccaactctaagatcttc
ctgaattgggaacacgtcaaggcagcggaaaatgagtctgaggtgacaggatacaaggtg
ctgtatcggccgaactggcccggcagaaccacctcactggaaaccaacaagaccagcgcg
gagctgcgaatcccctccggcgaggactacctcattgagatcaaagctctgagcgacggg
ggcgaaggcaccagcagcggtcccatccgcataccaaagatgtccagtcttaactcagaa
ggttgtaggtgtccaggttccacgaggattatcccttttgttatgtttttttgtagtttt
ctgttcattctttga
DBGET
integrated database retrieval system
