Pungitius pungitius (ninespine stickleback): 119229803
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Entry
119229803 CDS
T07626
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119229803
03036 Chromosome and associated proteins [BR:
ppug03036
]
119229803
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119229803
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119229803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
zf-C2H2_jaz
zf-met
LIM
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_15
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
119229803
NCBI-ProteinID:
XP_037346427
LinkDB
All DBs
Position
4:complement(14060743..14066628)
Genome browser
AA seq
767 aa
AA seq
DB search
MEGEVVAMETTQVADGKVQPEGGEGLIQGAVIATHGEVVDDMGMVVMDALDPTLLQMKTE
VLEGGGTVTVTGGDEGQIITLQVVNMEEQTGAALGLGQLQLVQVPVTRATVEGLQATYVD
ASTANKDADPVICHTLPLPEGFQVVKVGANGEVETVEQEEMEANNEELLEVRGEEEEDGV
EEEEEPAEVEATVPLEEDPEWSKDPDYQPISSLRNKGKKGKKSRLRYGEGNRDMDVSVYD
FEEEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKS
HTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTH
EKPFKCSMCDYCSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPY
ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFLEKGK
KCRYCDAVFHERYALIQHQKTHKNEKRFKCEQCDYCCRQERHMVMHKRTHTGEKPFACSQ
CDKTFRQKQLLDMHFKRYHDPNFVPTAFVCSKCSKTFTRRNTMLRHTDNCSGEIEDENGT
PAPKKARRGRKRKMQSRRDDDDTEDELDEVEEEEELSELEVEQDPPVVPIPAPVEPPVKR
KRGRPPKNKPNIPTSDLKLSTAAAVIRVEDEATGEVDDIIVKKEVGVDHDDHEEANDGAV
EEVVVGGGKSTTQLEELPQEEGAAPEVSEAPPNGDLTPEMILSMMDR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaggttgttgccatggagaccacacaagttgctgatggaaaggtccagcca
gagggtggagagggcttgatacaaggggccgtcatagctacacatggggaggtggtcgat
gacatggggatggtggtgatggacgctcttgatccgactctgctgcagatgaagactgag
gtgctggagggcggcggcacagtgactgttactggcggagatgagggacagatcatcacg
ctacaggtggtgaacatggaggagcagactggagcagcgttaggtcttggtcagctgcag
ctggtgcaggtaccagtgacaagggccactgttgaggggctccaagccacctatgtggat
gcatcaactgctaacaaggacgcagatccagttatctgtcacactcttcccttgcctgag
ggcttccaggtggtaaaagtgggtgccaatggtgaagttgagaccgtagagcaagaggag
atggaagcaaacaacgaggagcttctagaggtgaggggtgaggaggaggaggatggggtg
gaagaagaagaagagccagcagaagtagaagccactgtgcctctagaagaagacccagaa
tggtctaaagacccagactatcagcccatcagcagtctacgaaataaagggaagaaagga
aaaaagagccgcctgcgctatggagagggcaaccgtgacatggatgtctccgtgtacgac
tttgaagaagagcagcaggagggaatgctgtccgaagtgaatgctgagaaagttgtgggc
aacatgaagccaccaaagcccaccaagatcaagaaaaaaggtgtgaagaagaccttccag
tgcgagttgtgtagctacacctgtcctcggcgctccaacctcgaccgacacatgaagagc
cacacagatgagcgaccacataaatgtcacttgtgtggacgggcgtttaggactgtcaca
ctgctgagaaaccacctcaacacacacaccggcactagaccacacaagtgtacagattgt
gacatggcctttgtgaccagcggtgagctggtgcgtcaccgtcgctacaaacacacacac
gagaagcctttcaagtgctccatgtgtgactactgcagcgtggaggtcagtaagttgaag
aggcacattcgctctcacactggggagcgacccttccagtgcagtctgtgcagctatgct
agcagagacacttacaagctgaagaggcacatgagaacacactctggtgaaaaaccgtac
gagtgctacatctgccatgcgcgcttcacacagagcggcaccatgaagatgcatattctg
cagaaacacacagagaatgtggccaagttccactgcccacactgcgataccgtcatcgcg
cgcaaaagtgacctgggtgttcacctgcggaagcagcactcgtttcttgagaagggaaag
aaatgccgttactgtgacgctgtgtttcacgagcgttacgctctcatccaacaccagaag
actcacaaaaatgagaaacgcttcaagtgtgaacagtgtgactactgctgcagacaggaa
cgccacatggtaatgcacaagcgtacacacactggggagaagccatttgcctgcagtcag
tgtgacaaaacctttaggcagaagcagctcctggacatgcacttcaagcgctaccacgat
cccaactttgtgcccacggccttcgtttgcagcaagtgcagcaagacgttcacccgcagg
aacaccatgcttcgtcacaccgacaactgctcgggtgagattgaagacgagaatggaact
cctgcccccaaaaaggctcgtcggggcaggaagaggaagatgcagagcaggagggacgat
gatgacacagaagatgagctggatgaggtagaggaggaagaggagctaagtgagcttgag
gtggaacaggacccaccagttgtccctataccggcccccgtggagccaccagtcaaaagg
aaacgtggacggcccccaaagaataagccaaacatacccacatctgacctgaaactgtca
acagcggccgccgtcatccgtgtggaggacgaggccactggagaggtggatgacataatc
gtgaagaaggaggttggagtcgatcacgatgaccatgaggaggcaaatgatggggccgta
gaggaggtggtggtcggtggagggaagtcaactacccagctggaggagttgccccaggaa
gagggggcggcaccggaggtgtctgaggccccaccgaacggagacctcactcccgagatg
atcctaagcatgatggaccggtga
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