Pungitius pungitius (ninespine stickleback): 119229817
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Entry
119229817 CDS
T07626
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119229817 (ap5b1)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
119229817 (ap5b1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
119229817
NCBI-ProteinID:
XP_037346457
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All DBs
Position
8:10941929..10945894
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AA seq
951 aa
AA seq
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MTANWPERISAFSRSPSRFLSGTTAEDFLAELLRELRDDRASFGVKVLLLSPLCEHPSLL
CPSEAVGEETALELMSVLDQCPLKSVQFRCQLLVALTTVLVCTSCVAIRSRASQDFLDLL
LQMVQDTGDLRGDDGLRSPRATACDCLRELEACSPGLLAQRLELLGGLRQRESSRLHQAY
AALHTLVLRNAVYRLARDTGAGGEHLKALLGGNTWVAWEAELDSGPANDGDCSAALSSLT
LGPMGTVPTLQTGPDCKELRSVLSSLLEESYLLTPLCQAALLHRLTEVVAMVPGVPPAVF
RAQLLRLLGTSEVCLLHAMLLLKCAFTDSLFSAEDEAFLLQRLVVLSQHPLLSAAEKLFY
VDCLLHFPENRPIGCGADGDEALPVLLTPRLASALAPTVFDDGATGLARLNLLSLVYLEE
VEGEEGEESRGLAYLYEHVASLLRVVANGGGRELVVTFFRAAFLFLFYFCHVERYCRSLT
EELCQLYLRHAHLAPHVINLADRVQEKLAGSDWGVGFLRALQGVITETPPTCLTTRDLGY
HLKTLARAAEEGEITQHRTVCFLSGVIAAPPRSRPAAGGAWRLGNGLLAVCRRLLVHPGL
DSLFIPLADVLQHLTRCYGDTDIQDHARLYYTLLTSLSREKLAGVLAPEGGRRVEKRSLS
CIVGESEGLVSALTIHRTDTSIIGLTAPPPKPRGGAPADEVGELRQSESFPAEARAALEE
YRAQFDAPGFASHVAIDYRLTHIDGNPRFDQLFSIRLHFGLTDDHYEELADVSVPRLLRG
GAAPKVTLRLKPRRPHPTTLHASAIFTAEDGLSWFTVLPQVHVAFQQAFAPLPAPRAWGR
GGGAVLFEALWGEMSAEDQADCVTSLFCCQMEEGPLSALVEEHFLPFLVSERSDKGEFKV
LLFLPPRAHVLLRIQPGEPAQFHIATDDWRLLSHLNSYLLTITSSQGDAPP
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgaactggcccgagaggatctctgctttctcccgcagtccgtctcggttcctc
tccgggacaacagctgaggatttcctcgcggagctgctgcgcgagctccgggatgacaga
gccagcttcggtgtgaaggtcctcctgttgtccccgctgtgtgagcacccgtctctgctg
tgtccctcggaagccgtgggagaggagacggccctggaactcatgtctgtgttggaccag
tgtcccctcaagtcggtccagttccgctgtcagctcctcgtggccctcaccaccgtcctg
gtctgcacctcctgcgtcgccatccgctcccgtgcatcgcaggacttcctggacctgctc
cttcagatggtccaggacactggggacctgcgcggggacgacggccttcgctccccccgc
gccacggcgtgcgactgcctgcgcgagctggaagcctgctctccgggcctcctcgcccag
cgcctcgagctcttgggcgggctccgtcagcgagaaagctcccggctccaccaggcctac
gcggcgctccacactctggtcctgaggaacgccgtgtatcgcctcgcccgggacacggga
gccggcggcgagcacctcaaggcccttctgggtgggaacacatgggtggcgtgggaggca
gagctggactcgggcccggcgaatgacggagactgctctgctgcactgtcgtccctcacc
ctgggacccatgggcaccgtgcccaccctgcagacggggcccgactgtaaggagctgcgc
tcggtcctgtcctccctcctggaggagtcctacctcctcactcctctgtgccaggctgca
ctgctgcatcgactgacggaggtggttgccatggtgcccggtgtccctccagccgtgttc
agagctcagctgctgaggctgctgggcacgagtgaggtgtgcctccttcacgccatgctg
ctgctcaagtgcgcgttcaccgacagcctgttcagcgccgaggacgaggccttcctcctc
cagcggctggtggtgctctcccagcacccgctgctgagcgcggccgagaagctcttctac
gtcgactgcctgctgcacttccccgagaaccggccgatcggctgcggcgctgacggcgac
gaggccctccccgtgctgctgaccccgcggctcgcctcggccctggcgcccaccgtgttc
gacgacggcgccacggggctggcccgcctcaacctgctgtctctggtctacctggaggag
gtggagggagaggagggggaggagagcagggggctggcctacctctacgagcatgtcgcc
tcgctgctgcgcgtcgtggcgaatggcggcggccgcgagctcgtcgtcaccttcttccgg
gccgccttcctcttcctgttctacttttgccatgtggagcgctactgccgcagcctgacg
gaggagctgtgccagctctacctgcgccacgctcacctggcgccgcacgtcatcaacttg
gccgaccgggtccaggagaagctcgccgggtccgactggggggtgggattcctgagggcc
cttcagggggtcatcaccgaaaccccgcccacttgtctcaccacgcgggacctgggttac
cacctcaagacactggctcgcgcggccgaggagggggagatcacccagcaccgcactgtc
tgcttcctgtctggcgtcatcgctgcgcccccccgttcccggcccgccgccggtggcgcc
tggcgcctggggaacggcctgctggcggtctgccgccgcctcctcgtccaccccggcctg
gactcgctgttcatccccctggccgacgtcctgcagcatctcacccgttgctatggcgac
acagacatccaggaccacgcccgcctctactacaccctgctgacctcgctgtccagggag
aagctggccggggtcctggcccccgagggggggcggcgggtcgagaagcgatcgctgtcc
tgcatcgtaggcgagagcgagggtttggtgagcgcgctaaccatccaccggacggacacg
tcgataatcgggctgacggcgcccccccccaagccccggggaggggcgccggctgatgag
gtgggtgagctgaggcagagtgagagcttccccgcggaggctcgcgccgctctggaagaa
taccgagcgcagttcgacgcccccggcttcgcctcacacgtcgccatcgactaccggctg
acccacatcgacggcaacccccgcttcgaccagcttttcagcatccgcctccacttcggc
ctcacggacgaccactacgaagagctggccgacgtcagcgtcccgcggctgctcaggggg
ggggcggcgcccaaggtcacgctgcgactgaagcctaggcggccccaccccacgacgctc
cacgccagcgccatctttacggccgaggacggcctctcctggttcaccgtcctgccgcag
gtccacgtggccttccagcaggccttcgcgcccctccccgctccccgggcctggggccgc
ggcgggggggcggtcctgttcgaggctctgtggggggagatgagcgcggaggaccaggcg
gactgtgtgaccagcctgttctgctgccagatggaggaggggccgctcagcgcgctggtg
gaggaacacttcctcccctttctcgtatcagagcggtccgacaaaggcgagttcaaggtg
ctcctcttcctcccgccgcgggcccacgtgctgctgaggatacaacccggggaaccggcg
cagttccacatagccacagatgactggcggcttctgagtcacctaaattcttatttactg
acaatcacgtcctcgcagggcgacgcccccccatga
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