Pungitius pungitius (ninespine stickleback): 119229832
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Entry
119229832 CDS
T07626
Symbol
lamb3
Name
(RefSeq) laminin subunit beta-3
KO
K06244
laminin, beta 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04382
Cornified envelope formation
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
ppug04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119229832 (lamb3)
04518 Integrin signaling
119229832 (lamb3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119229832 (lamb3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119229832 (lamb3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
CCDC18_2nd
Rod_CreS
CEP135_TSGA10_CC
DUF948
ODF2_C
LEKR1
LAMB1
CCDC171
CCDC39
CCDC89
NOCA1_mid
RmuC
Sec10_N
BopA_C
MscS_porin
AAA_13
FH2
COG6_N
ATG17_like
F5_F8_type_C
Filament
DUF4407
EzrA
CEP131_C
cas_Cpf1_2nd
DUF6744
Motif
Other DBs
NCBI-GeneID:
119229832
NCBI-ProteinID:
XP_037346486
LinkDB
All DBs
Position
8:9215710..9231319
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AA seq
1181 aa
AA seq
DB search
MLFFSHLFQTLKLEGRNMRILLLLTAITAASQAQTDCSRGACYPPSNDLLFGRAQLLHAS
STCGLMGSEIYCTPYQQRKMECCPCDSRNPNSKLAHTVRDALPTSGPNRWWQSVKEVSPV
TLQLDLDNLFQLDNVVLNFKGPRPGSFVIERSLDNGRSWQPALYLATDCGRTFPGIPTTS
PQRLDDPYCSTLPPTGANPYQDHQITFSPLRQYANVPTTKSQIIEDASPLTGLRVRFTEL
GDVPRPPGRAFSRFFALREMKVMGSCMCHGHANQCLPDTSNNLLPDSVQVHPRCDCQHNT
AGVNCERCADLFQDLPWRPAEDSNPHICKRCECNNHAQRCRFDQARYEATGRRSGGVCES
CMHHTTGPKCDQCAPGFQTNPRSQMDRPDACIRCICNTEGTVNGGRCDESTGSCLCKENV
EGPRCDRCKRGYYNLSPSNPLGCSECSCSTDGSQSDACDPITGKCSCRSHFQGLKCEVCS
QGYWQPPFTGCCQPCGCDSTRSYGDTCDQLTGQCQCRPGFGGLKCTECAENTYGDPLIGC
KLCRCDTEGTRSEVCDKRTGACLCRPGVNGTRCDSCSRGHCDSFPGCKTCPSCFFTLDAQ
REKLSSTLEKLSLRLPSRPVDGDLGNFTPRIRELETSLNLIQNSISLPPSVVVQVDDALS
ELNKLRDQVDKINNDLSPLERAPGLNSELDRLQALLDSLILEHKAKMDAKNNSVGQNNTG
ALSAIRNAYNESTDAAKKVISTKKPLKESADIREATMDLQNKVQPGNTGDLHKLNQSMAS
QPNLTPAAKQVCGSVRSEPCTPLQCAGGDLCPPDGTPPCEKSQVCVGALPLTKRADADAK
DVKDRLDKLTGKITDAADKLQKTQETTNEVRKSAEKLSNKLKQARDGLEDDLKETRDVLN
KLKDFLSDPSSNLTHIQEVSDWILNAKLPLNLAGLMRKLEELKNLAANLPDSSSVLNEAE
PQLDAARKLLQEAQDARDTALGVKADVDGLLDGFGSVEGSLSDLEGRLQDTMDDIDNLNT
NLIEVEKQLTPAEKALDDASKLITPMKPQLDELKDLLQTVAPLAQNLKDNAESAEDEAAA
ANKDLLTLEEQLGRLKDQAPPTGSEGSELGDRVEKLREEAGALVNSTNDMMKALEGKAES
LRGLQDEVLQKSTELEGLDVKLKELLDQLRQKGEDLSTCQG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgttatttttttctcatttgttccagactcttaaattggagggacgaaacatgagaata
cttttacttctaactgccatcactgcagcatcacaagcccagactgactgctctcggggg
gcttgttacccccccagcaatgacctgctgttcggcagggctcagctgctccatgcctcc
tccacctgcggcctcatgggctccgagatctactgcaccccataccaacagaggaagatg
gagtgttgtccatgtgactccaggaacccaaacagtaagctggcccacactgtgcgggac
gccctgcccacctctggtccgaatcggtggtggcagtctgtgaaagaagtgagcccggtc
actctccagttggacctggacaaccttttccagctcgacaacgtggtgctcaacttcaag
ggtcctcgtcccggttcctttgtcatcgagaggtcgctggataacggccggtcctggcag
cctgccctctacttggctactgactgtggaagaactttccctggcatccccacaacgtcg
cctcagcgcctagatgacccatactgctccacactgccccctactggggcaaacccctac
caggaccaccaaatcacattcagtcctctgcgtcagtatgccaatgtccccactactaaa
agccaaataatagaagatgcgtctccgttaacgggtctgagggtgaggttcaccgagctg
ggagacgtgccgcgtcctccgggcagagctttcagtaggttcttcgccctgagggagatg
aaggtgatgggcagctgcatgtgtcacggacacgccaaccaatgcctgcccgacaccagc
aacaacctgctgccagacagcgtgcaggttcaccctcggtgtgactgccagcacaacaca
gcaggggtcaattgtgagcgctgtgcggacctcttccaggatctgccctggagacctgct
gaggatagcaacccccacatctgcaaacgctgtgagtgtaacaaccacgcccagcgctgc
cgttttgaccaggcacggtatgaggccactgggcggaggagtggaggtgtatgtgagagc
tgcatgcaccacaccacggggccaaagtgtgaccagtgtgctccgggcttccagacgaac
ccccgcagccaaatggaccgccccgacgcctgtatccgctgcatctgcaacaccgagggg
acagtgaatgggggccggtgtgacgaaagcactggatcctgtctgtgtaaagagaatgtt
gaaggtccccgctgtgaccgctgtaagagaggctactacaacctgagcccctccaacccc
ctgggctgctccgagtgctcctgttctacagacggctcccagtcggatgcttgtgacccg
attactggcaagtgttcctgtcgctcccacttccaaggcctgaaatgtgaagtgtgttca
caaggctactggcaaccgcccttcacaggatgctgccaaccctgcggctgtgactctacc
aggtcatacggtgatacatgtgaccagttgacaggtcagtgtcagtgcagaccaggcttt
ggaggcctgaaatgtacagagtgtgcagagaacacgtacggagaccccctaatcggctgc
aaattgtgccgctgtgatactgaaggaactcgttcagaggtttgcgacaagcggacaggc
gcctgtttgtgtcggcccggtgtcaacgggacccgctgtgactcgtgcagtcgagggcac
tgtgactccttccccggctgcaagacatgtccctcatgcttcttcaccctggacgcccaa
agagagaagctcagctccactctggagaaactctccctcagattaccttcccgtcccgtc
gatggtgaccttgggaacttcacacctcgcattcgcgaactggagaccagcctgaacctg
atccagaactccatctcccttccacccagtgttgtcgtacaggttgatgatgctctctcc
gaactcaacaagctcagagaccaggtcgacaagattaacaatgacctttcacctctggag
agagctcctggtctgaactcagagctggacagactgcaggctctgctggacagcctcatt
ctcgaacacaaagccaagatggatgcaaagaacaactctgtcggtcaaaacaatacagga
gcattgtctgcaattaggaacgcctacaatgagtccacagatgcagccaagaaggtgatt
tccaccaagaagccgctgaaggagtcagctgatatcagagaagctactatggacctccaa
aataaagttcagccaggcaacacgggagacctgcacaagctgaaccagagcatggcctcc
cagcccaatctcactcctgctgccaaacaggtctgtggcagtgttcgctcagaaccatgc
acccctctgcagtgtgcgggcggagatctgtgtccaccggatggaaccccaccttgtgag
aagagtcaggtgtgtgtaggcgccctgcctttgaccaagagagctgacgctgatgccaaa
gacgtgaaagaccggctggacaagctcacagggaagatcacagatgctgcagataagctc
cagaaaacacaggagacaaccaacgaggtaagaaagtctgcagagaagctttccaacaag
ctgaagcaggccagagacgggctagaagacgacttgaaagagacgcgggacgttttgaac
aagctcaaagatttcctatcagacccgtcctccaacttgacccatatccaggaggtgagt
gactggatcctgaatgccaaactgcctctcaacctggcaggtctgatgagaaagctggag
gagctaaagaatctggcggccaatctaccagacagctcatctgtgttgaatgaggccgag
ccgcagctggacgcggcccggaaactgctgcaagaggcccaggacgccagggatacggca
ctgggagtaaaggccgatgtggacgggttgctggatggctttggctcggtagagggctcg
ctctctgacctggagggcagactgcaggacaccatggacgacatagacaacctgaacacc
aacctgatcgaggtagaaaaacagcttaccccagctgagaaggctcttgatgatgcatca
aaactaataacgccaatgaagcctcagctggacgagctcaaggacctgctgcagactgtt
gccccattggcccagaatcttaaggataatgcagaaagtgctgaggatgaagcagctgct
gcaaacaaggacctgttgaccctggaggagcagctgggccgtctaaaggaccaggctcca
cccactgggtcagaaggatcggagttgggggatcgagtggaaaagctgcgggaagaagct
ggagctctcgtcaactccactaacgacatgatgaaggctctggaaggtaaagcggaatct
ctccgtgggctgcaggatgaggtccttcagaagtcaacagagcttgaaggactcgacgtt
aagcttaaagaacttttggaccaacttcgtcagaagggtgaagacctcagcacctgtcaa
ggctga
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