KEGG   Pungitius pungitius (ninespine stickleback): 119229863
Entry
119229863         CDS       T07626                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    119229863 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppug03019]
    119229863 (wdr82)
   03036 Chromosome and associated proteins [BR:ppug03036]
    119229863 (wdr82)
Messenger RNA biogenesis [BR:ppug03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     119229863 (wdr82)
Chromosome and associated proteins [BR:ppug03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     119229863 (wdr82)
    COMPASS/SET1 complex (yeast)
     119229863 (wdr82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR19_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 WD40_RFWD3 VPS8_N Beta-prop_EIPR1 WD_LRWD1 MinC_C
Other DBs
NCBI-GeneID: 119229863
NCBI-ProteinID: XP_037346552
LinkDB
Position
8:20750898..20754368
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGESIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSSDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRVLDAFKGAVLHSFGGYNNSKC
VPLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctcacggacaatgtgctgcggagcttccgagttgctaaggtgttccgtgagaac
tcagacaaaattaattgttttgatttcagttcaaacggcgaatcgattatttccagcagc
gatgacgattccttagtcttgtacgactgccaagagggaaaaccgaagaggactctctac
agcaaaaagtatggagtggatctgatccggtacacgcatgctgcaaacactgtggtctac
agttccaacaaaatcgatgataccatccgatatctgtctcttcatgacaacaaatacatc
cgctactttcccgggcataataaaagagttacatctctctccatgtctcctgtggacgac
acttttatctctggctcatcggacaaaacaatcagactttgggatttgcggtcgcccaac
tgccagggtttgatgcacctgcaggggaagccagtgtgctcctttgatccagagggttta
atttttgctgcggggataaattccgaaatggttaagctttatgatctgcggtcgtttgat
aagggtccctttgcaacattcaagcttcagtacgaccggacgtgcgagtggaccggactc
aagttcagcaatgatggaaaactcattcttctttctacaaatggcggcgcccttcgggtc
ttggatgcctttaagggtgctgtgctacattcctttgggggctacaacaacagtaaatgt
gtaccgctggaggcgtcgttcactccggattcccagtttgttatgatcggctccgaggac
ggaaagatccacgtgtggaacgcagagagcggcatgaaggtggctttattagacgggaag
cacacgggacccataacctgcctgcagttcaaccccaagttcatgacgtttgcgagtgcc
tgctccaacatggcattctggctgccgaccattgatgactga

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