Pungitius pungitius (ninespine stickleback): 119229870
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Entry
119229870 CDS
T07626
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119229870
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
OB_2TM_halo
Motif
Other DBs
NCBI-GeneID:
119229870
NCBI-ProteinID:
XP_037346564
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Position
8:complement(16233518..16246360)
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AA seq
834 aa
AA seq
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MRGSRLLGRKITSRSPKLGILLVNMTSTSCILVLALCSSALCTNLHEGDNLSGLRRLQRE
LVGDEERRSSEKSELSDRSAGVREQTCAAMAGVDSILHNNTHSFTFKMRTMGSLSLAWVG
DGSGVLLVLTTFQVPLFMMRFGQSNLYRSEDYGTTFKDVTHLINHTFIQSEFGIAISPDH
SGKVMLTGDVSEVGGFKLFRSQDFGLTFDPTDLPFEPLIQMMYNPRDCNVLLTLSITLDL
WLSEDFGATWRKIHDSVCLVRWGKKSSIYFTTHYNGSCSDKGMLELKKTVDYGLSFQTIA
TRVYSFVLGGRFVFASIMTGTGTERMIHVSADGGEVWNMAQLPKVNHEQFYSILAANQDM
IFMHVDNPGDSGVGTIYVSDDRGAVFSKSLERHLYTTTGSDTDFTAIASLRGVYMTSVLT
EDHVMETVITFDQGAKWRPVRRPDNSQCDTETSTNRPNRCRLHIHATYSTTMKMNVPMLP
LSQPSAVGLILAHGSVGDAESALSPDVYVSDDGGYSWLWALRGPHHYAILDSGGLLVAVE
HTNSPVNQIKFSTDEGQCWHTYNFTSEPLHFSGMDSEPGSRSMNVSLWGYKNDFSRWLVI
TIDLRKLLTRNCTEGDYVPWVAHSTDPRGSIDGCVLGYKEIFLRLRKESVCWNGREYATT
RKLSSCTCTMDDYHCDFGYHRPENSSECVEQAEMKGHPLEFCFNGTTEQLQTSGYRKIPG
DQCEGGFQPERKETDLRRMCTSNALYPNSLTEKSSPNTAVIVMVVIAMLLTSAVAGVWLV
KKYVCGGRFLVHRYSVMREHVEAAKIEGVDDIDPHYMETGKAQYNEDSDQDLLE
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgagggggagccgactgctgggacggaaaatcacttcgcggagtccgaagttgggcatc
cttctagtaaacatgacgtccacctcttgcattttggtgctcgctctgtgttcgtccgcg
ctgtgcacaaacctccacgagggagacaacttgtcaggtttgaggaggctgcagcgggag
cttgtcggtgatgaggagcgacgcagttcagagaagtccgagctctcggaccgcagcgca
ggagtccgtgagcagacatgtgcagccatggcgggagtggattcaatcctgcacaacaac
acgcactcttttaccttcaaaatgaggaccatgggttcactgtcactggcctgggtggga
gacggatccggggtcctgctggtgttgacgacgttccaggtgccgttgttcatgatgcgc
ttcggccagtccaacctctacaggagtgaagactatgggacgacgttcaaagacgtgact
cacctgatcaaccacaccttcatccagagcgagttcggcatcgccatcagtcccgaccac
tctggcaaggtgatgctcaccggcgacgtgtccgaagtcggggggttcaaactgtttcgc
tcgcaggactttggcctgacctttgaccccaccgacctgccgtttgagcctctcattcag
atgatgtacaaccccagagactgcaacgtactgctgacgctcagtatcacgttggacctg
tggctctctgaggactttggtgccacctggaggaagattcacgacagtgtttgtttggtc
agatggggtaaaaaaagcagcatctactttacaacgcactacaatggatcatgcagtgat
aaaggaatgttggagttaaagaagacggtggactacggactaagttttcagaccattgca
acaagagtttactcttttgtgctcggaggacgctttgtttttgcctccatcatgactggc
acgggtacagaacgtatgatccacgtgtcagcagacggaggggaggtgtggaacatggct
cagcttcccaaggtcaatcatgagcagttctactccatcctggcagccaatcaggacatg
atattcatgcacgtggacaaccctggagactcgggtgtgggaaccatctatgtatctgat
gacaggggagccgtgttctccaagtccctggagcgccatctttacacgaccacgggtagc
gacacagactttacggccattgcttcactgcggggcgtctacatgaccagcgtgctcaca
gaggatcatgtaatggagacagtgatcacctttgaccaaggagcaaaatggcggccggtg
cgcagaccagataacagccagtgtgacacggagacctccaccaacaggccaaatagatgc
cgacttcacatccacgccacctacagcaccaccatgaagatgaacgtccccatgctgcct
ctctcacagcccagtgccgtgggcctcattctggctcatggcagcgttggagacgcagag
tcagctctctccccggacgtgtacgtgtctgacgacgggggctactcgtggctgtgggct
ctcaggggcccccaccactacgctatactggactctggagggctgctggtggctgtggag
cacaccaactcacctgtcaaccagatcaagttttcaacagacgaggggcagtgctggcat
acgtacaacttcaccagcgagccgcttcacttcagcggcatggacagtgagcccggctct
cgctccatgaacgtcagcctgtggggctacaagaacgacttcagccgatggctggtgatc
acaatagacctcaggaagctcctcaccagaaactgtactgaaggggactatgtcccgtgg
gtggctcactctacagaccccagggggtctattgatggctgtgtgctgggctataaagag
atcttcttacgcctgaggaaagagtctgtctgctggaacgggagggaatatgccaccact
aggaagctgtccagctgtacatgtacaatggatgattatcactgtgactttggatatcac
cggccagagaacagctcagagtgcgtggagcaagcggagatgaagggtcatcctctggaa
ttctgctttaatgggaccaccgaacagctccagaccagcggctaccggaagattccagga
gaccagtgtgaaggaggttttcagccagaaaggaaggagacagacctgaggaggatgtgc
accagcaacgccctttatccaaactctctgacggaaaaaagttcaccgaacaccgctgtc
atagtgatggttgtcatagcgatgcttctcaccagtgctgttgcaggcgtttggctggtt
aagaaatatgtctgcggaggacggttccttgtgcacagatactctgttatgagggagcac
gtcgaggctgctaaaatagagggagttgatgatattgaccctcactacatggagactgga
aaagcacagtacaacgaagactcagatcaggacctcttagaataa
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