Pungitius pungitius (ninespine stickleback): 119229900
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Entry
119229900 CDS
T07626
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2 isoform X2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug00310
Lysine degradation
ppug01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119229900 (prdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119229900 (prdm2b)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119229900 (prdm2b)
Enzymes [BR:
ppug01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
119229900 (prdm2b)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119229900 (prdm2b)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
119229900 (prdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
zf-C2H2_6
SET
zf-C2HC_2
zf-C2HE
zf-C2H2_jaz
zf-H2C2_2
TPR_Trm732
Motif
Other DBs
NCBI-GeneID:
119229900
NCBI-ProteinID:
XP_037346609
LinkDB
All DBs
Position
8:20586614..20596698
Genome browser
AA seq
1501 aa
AA seq
DB search
MWDGEEGPKEEEEDDERPSTAGPSQQLQETLPMRSTERNNVEDMAMTQRGNEEEEDAEDL
ADQRSPAADSMQSKSGSLMTCPEGSHKEPQGQVDSSSLAGQEPQVDPDPDLDPDPDDLEG
DPHGESYPCQHCERHFSTRQGLERHIHIHAITNQQTQLFKCRYCSKSFGSQVGRRRHERR
HESGLKKRPGSLAGTASLLSPAMLTDASSPDCTSPTSQCIAIGSQFTGGPSLHNSELQRK
ESRPYADRPFMLDENGESKELHPCKYCNKAFGTHTNMRRHQRRIHERHLLPKGVRRKGML
LQEASAQKKQQQQPGESPSASPPPVYVPSADTEDEVDRDDYAVDISKNISENLSFYIDGK
IVSTSSVSSCEVIEVDSRSAALFGLDTVIIGPNQISQALKAEGRTSAAKQISSIGQPAAK
RRTSTPPFVPSLKVETESASLTASSSSSSSSSTSSSSNLLVGGLFQQAADSSAFQREKTV
YLSPKLKQLLQTQDIQKSTLALITESHRLASPLSVTQLPGASGRFKRRTSSPPSSPQLSP
GCKAESCKSEAVSSFALKVPKLESLGALPRGSLPEREDGGGPKPSEDDTHGQTSSNSGGN
SCNQQPLDLSSSVGRCRDSAVKVLGDSALDLSFGRKSNAEPESKGGPAPQPLVKKRKPNT
SMLEKVLMNDYLGLPPPAEEGPSALANLSCYNSRSPSIAAESAHPSPPSLTPVTMNPSSP
GDSSVTSPTPPPPLLPTIPSPPAVPGSPLSQPSDSTSHRPLPVLSPKMSPRSVDRSPPSD
SEDDSSADGNEDETRVPQDLPSSPLKDPAERSASFSPPANGKMNQSDDSVTEESPSVLAP
QPESSSSHDQSPSPPSLTPPPIKIKEEPQACTDEPPVTNHAAAPGADPSPRPAAPGKTAE
GVDSAYCTTFVCNVCEEPFDSIKELSGHIAEHAADWPFKCEFCVQLFGDAAALLAHRTAL
HGVGRIFVCSVCSKEFAFLCNLEQHQKDSHPAETCSHTAVESGKLRPQNYTDPSRAKEES
SPSTPAPDATDEAAAAAAAPPPRGDEDLAKEEPGVNGNHAEGGPEDPNEELYTTIKIMAS
EGGKPKAPDVRLGLNQHYPSYKPPPFPYHSRSHAGSVASATNFTTHNIPQTFSTAIRCTK
CGNSFDNMPELHKHILACASASDKKRYTPKKNPITLKEIVKSPNGVASPSAAAAAAAGQS
PFRRMGQPKRLNFNQDTNGKTKMSALSKKKNQLVQKAISQKNKAATTAKKTPVKEEEQQQ
QASNACPHCSREFTYPASLGKHMAFSCPMKPAVKRGKKGLAEVKKEAVERTLKLRKKASD
SEAEPEPKRLGKTRARSSGAAEPEPAQASRGKAAAGAGPGRLKRPASFPASVSASKKTKK
GQFQSLPPTPSAPDTPGDGAQQQQQQQQQRPAMRMQRMGKEAPPKGSGEAKSPPPLPAAP
PPQQQQQQLKKEERFSLRMRERVGGPVTRSLQMVTAAPSVDAKTEEAPIQEPKETQEVLL
K
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatggagaagaaggtccaaaggaggaggaggaggacgacgagaggccgtcaacc
gcagggccctcgcagcaactccaggaaactcttcccatgagaagcactgagcgtaacaat
gtagaagacatggcaatgactcaaagaggaaacgaggaagaggaggatgctgaggatttg
gcggatcagcgttcacctgcagctgattccatgcaaagtaaatcgggttcattgatgaca
tgccccgaaggaagccataaggagccacagggacaggttgactcgtcctcacttgcggga
caggaaccacaggttgatcctgatcctgatctcgaccccgacccggatgacctcgagggc
gacccccacggagagtcgtatccctgccaacactgcgagcgccacttctccaccaggcag
ggtctggaacgtcacatccacatccacgccatcactaaccagcaaacgcaactgttcaaa
tgccggtactgcagcaaatcctttggctcacaggtggggcggcggcggcatgaaaggcgg
catgagagtgggctgaagaaaaggcccggctctctggcgggcaccgccagtctgctcagt
cctgcgatgctgaccgatgcctcgagccccgactgcaccagcccgacgagtcagtgcata
gccataggttcccagtttactggagggccgtctctgcacaactctgagctgcagagaaag
gagtcgaggccttatgccgaccgtccttttatgttggatgagaacggcgagtcgaaggag
ctccatccttgcaagtactgtaacaaagcgtttggcacacacacaaacatgcgccggcac
caacgtagaatacacgaacggcacttattaccaaagggagttcgcaggaaaggcatgctg
ctccaggaggcctcggcgcagaagaagcagcagcagcagcccggcgagtcacccagcgcc
agccctccgcccgtctacgtgcccagcgcagacaccgaagacgaggtggaccgggatgat
tacgcagtcgacatatccaaaaacatctctgagaatttgagcttctatattgacggcaag
attgtgtccaccagctcagtgagcagctgtgaggtgatcgaggtggactccagatctgcg
gctctgtttggcctggacacggtcatcatcggtccaaatcagatcagtcaggcgctgaag
gcggagggccgaaccagtgcagcgaagcaaatctccagcatcgggcagccggctgccaaa
agaagaacgtccacccccccgtttgtccccagccttaaggtcgagaccgagtcggcatcg
ctcaccgcctcttcttcgtcgtcttcatcatcctctacatcttcctcgtccaacctgctc
gtgggtgggttgttccaacaggctgccgactcgtctgcgtttcaacgggagaaaacggtc
tatctctcaccgaagctcaaacagctccttcagacacaagacattcagaaatcaaccctt
gccctgataacagaaagccacaggttggcctcgccgctgtcagtcacgcagctcccaggg
gcctcgggcaggttcaaaagaagaacgtcctcgcccccgtcatctccacagctcagtccc
gggtgtaaagcggagagctgtaaatccgaggcggtgagctcattcgccctaaaggtgcca
aagctggaaagcctcggcgcgttacctcgcggcagcctcccggagagagaagatggcggc
ggcccgaagccgtcggaagacgacacgcacggccaaacctcatcaaacagcggcgggaac
tcgtgcaaccagcagcccctggacctgtcgagctccgtcggcaggtgcagggacagcgcg
gtcaaggtgcttggagattcagctctggatttgagcttcggtcggaagagcaacgccgag
cccgaatcgaaggggggtccagcaccgcagccgctggtgaaaaagaggaagcccaacacc
agcatgcttgaaaaggtgctcatgaatgattatttgggtctcccgcctccagcagaggag
ggcccctcggccttagcaaacctgagttgttacaactcgcgctccccgagcattgccgcg
gagtccgcccacccctcccccccctccttgacccccgtcaccatgaacccctcttccccc
ggtgactccagcgtgacgtccccgacgccgcctccccccctgctacctaccataccgtct
cccccagctgtgcccggctcccccctctctcagccttcagactccacgtcccacagacct
ctgcccgtcctctcgcccaaaatgtctcccaggtcggtcgaccgcagtcccccgtctgac
tcggaggacgattcgtccgccgatggaaacgaagacgagacccgtgtgccacaggacctc
ccgagcagtcccctcaaagatccggctgaacgctcggcgtcatttagcccccccgcaaac
ggaaaaatgaaccaaagcgacgactcggtaaccgaggaatctccttccgtcctcgcgccg
cagccagaatcctcctcttctcacgatcagtccccatcgccgccttcgctgacccctcct
ccgattaagatcaaagaggagcctcaggcctgcacggatgagccgccggtcacgaatcac
gccgctgcgcccggggcggacccctcgcctcggcccgccgctccgggcaaaacagcggag
ggcgtcgactcggcgtactgcacgacctttgtgtgcaacgtctgcgaggagccgttcgac
tccatcaaagagctgagcggccacatcgccgagcacgccgccgactggcccttcaagtgc
gagttctgcgtgcagctgtttggcgacgccgccgccctgctggctcaccgcacggcgctc
cacggcgtgggcaggatctttgtgtgctcggtttgctccaaggagtttgccttcctctgt
aacctggagcagcaccagaaggattcgcatccagccgagacgtgctcccacacggccgtc
gaaagtggcaagctcaggccgcagaactacacggacccgtccagagccaaagaggagagc
agcccctcaacgccggcgccggacgccaccgacgaagcagcagcagcagcagcggcgccg
ccgccgcgcggcgacgaggacttggcgaaagaggagcccggcgttaacggtaaccacgcg
gagggggggccggaggaccccaacgaggagctgtacactacaataaagataatggcctcg
gaaggcgggaagcccaaagccccggatgtccgcctcggcctcaaccaacactaccccagc
tacaaaccgccgccgtttccctaccacagccgctcccacgccggctcggtggcctcggcc
accaacttcaccacccacaacatcccgcagacgttcagcaccgccatccgctgcaccaag
tgcggcaacagctttgacaacatgcccgaactgcacaagcacattttggcctgtgccagt
gccagtgacaagaagcgctacactcccaagaaaaaccccatcaccctcaaggagatcgtg
aagagtcccaacggcgtggcgtccccctcggccgccgccgccgccgccgcaggccagagt
cctttccgaagaatggggcagccaaagagactcaacttcaaccaagacacaaatgggaaa
acgaaaatgagcgccctcagtaagaagaaaaatcagctcgtccagaaggcgatttcacag
aaaaataaagctgccaccacggcgaagaagactcccgtgaaagaggaggagcagcagcag
caggcctctaacgcttgcccccactgcagtcgcgagttcacctaccctgcaagcctcggc
aagcacatggccttcagctgccccatgaagcccgctgtgaaaaggggcaagaaaggcctg
gcggaggtgaaaaaagaggcggtggagagaaccctcaagctccgaaagaaagcctccgac
tctgaggcggagccggagcccaaacgcctcggaaagaccagggctcgaagctccggcgcg
gcggagcccgaacccgcccaggcaagcagaggaaaagccgctgccggcgccgggccgggc
cgactgaagaggcccgcctcgttcccggcatccgtttctgccagcaaaaaaacaaagaag
ggccaatttcagtcactacctcccaccccgtcggcccccgacactcccggtgacggcgca
caacaacaacaacagcaacagcagcagcggccggccatgagaatgcagcgtatgggcaaa
gaggcccctcctaagggatcaggcgaggccaaatcgccgccacctcttcctgctgctcct
cctccgcagcagcagcagcagcagctgaagaaggaggagcggttctcccttcgaatgagg
gagagagtaggtggtccagtcaccaggagcttacaaatggtcaccgccgctccttctgtc
gacgccaagacggaagaggcgccaattcaggagccgaaagagactcaggaagtgctgttg
aagtga
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integrated database retrieval system
