Pungitius pungitius (ninespine stickleback): 119229921
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Entry
119229921 CDS
T07626
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119229921 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119229921 (usp48)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119229921 (usp48)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119229921 (usp48)
Ubiquitin system [BR:
ppug04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119229921 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
DUF6276
Motif
Other DBs
NCBI-GeneID:
119229921
NCBI-ProteinID:
XP_037346645
LinkDB
All DBs
Position
8:9245381..9259679
Genome browser
AA seq
1055 aa
AA seq
DB search
MRVWLTLRCRTMAPRLQLEKAAWRWVETVKPEEIRQEHIELAYRVNLPACKRGTCRRNCK
GNPNCLVGIGEQAWLGDIDENAFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFH
NLELRRSLYQCHNSRAEEHNAESEYEPQSICEHLQYLFALLHNSNRKYIDPTGLVKALGL
DTGQQQDAQEFSKLFLSLLEDTLSKQKNPHLQNVIQRQFCGQFSYVTVCNECGRSSALPS
RFYELELNIQGNKNLTECVTEFLKEEKLDGENRYFCESCQTKQCATRRIRLHSIPPTLNL
QLMRFVFDRQTGHKKKLNTFISFPEQLDMGPFLEGKPDHKCVYELSAVLIHRGISAYSGH
YIAHVKDARTGDWYKFNDEEIEKMEGKKLQLGTEEDIAETVKSQTRKPKCIKGYHCSRNA
YMLVYKVQEEENTDHSLTNVEVPAFLQRLVDQDNHKFEEWCNEMADMRKQSVDKGKAKHE
EVKELYELLPAKDGEPYEFIPLEWLKKWLEDSTATKEINNSLFLCCHGKLHPDRVADSKR
VSLQAAQLLYERYGGGPRMDGSSLCRECVGQRCRVLRLKNQLNEDYKEVTNLVKRTLSGE
GYWVGKASLRSWRQLALEQLEEDEHETKHSNGQTNGQGPHKEFGSELSEGNGDEMKTFNE
DIVCCHGALTILETERKLVSSEVWTKLREYFPKAPEFTQIQESCQQCLTLEQEEKDNEAV
SKMMALDQKNQLLNLFNEKNRPTLNKWPEETDVLYIVPLFFVDEWRKFIRRPTKSSPVSN
VGNTLLLCPHGGFMFTYDSLINGDGQHVAVLWPSEWEVISRLFIVDQPISIHCFRETSLS
DATTQYTTQPDICWECRESFLFQQQRDLREYTQATIYIRKVIEDQRMTKEAAPELNASSS
ETEEDKEEVPKVNGETDLDFSQSQDGAKRLKLSDDSTAASAPGTNVTKLGGIRRSTRHRK
LRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKSLTDDAATLGSLGIIPESII
CLKADEPIADYAAMDDVYQVRMPEEGFKGTGLLGH
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgtggctaacattacgttgtaggaccatggcgccccgcttacagctggagaaa
gcggcttggcgttgggtggaaactgtgaaaccagaagaaataagacaggagcatatcgag
ctagcatatcgcgtcaatcttccggcctgtaagagaggaacttgcaggaggaattgcaaa
ggaaatcccaactgtcttgtgggtattggtgaacaggcttggcttggggatattgatgaa
aatgctttccacaacattgacgacccaaattcagagcgtcgggacaagaacacatttgtt
ggcttgaccaacctgggtgcaacatgttatgtaaatacattcctgcaagtgtggttccac
aacctggagctgcgtaggagcctctatcagtgccacaattcccgagcggaggaacacaat
gctgagtctgagtacgagccgcagtccatctgtgagcacctgcagtatctttttgcactc
ctgcataacagcaacagaaaatacatcgaccctacaggactggtcaaagcactgggcctg
gacacagggcagcagcaggatgcccaggagttttcaaagctcttcttgtctctgttggag
gacacgctgtccaagcagaagaaccctcacctgcagaatgtcatccagcgacagttctgt
ggacagttctcctacgtcactgtctgtaacgagtgtggacgatcatctgcgctgccatcc
cgattctacgagctggagctgaacatccagggcaacaagaacctcaccgagtgtgtcaca
gagttcctgaaggaggagaagttggatggagagaaccgctacttttgtgagagctgtcag
actaagcagtgtgccacgcgcaggatcagactgcacagcattcctccaactctcaacctg
cagctcatgcgctttgtcttcgataggcaaacgggccacaagaagaagctcaacaccttt
atcagttttccagagcagctggacatggggccttttttggaaggaaaaccagaccacaag
tgtgtttatgaactgagtgcggttctgatccatcgtggcatcagtgcctattcgggccac
tacatcgcccatgtgaaggatgctcggacaggcgattggtacaagttcaacgacgaggag
attgagaagatggaaggcaagaagctgcagctcggtactgaggaggacattgctgagaca
gtaaagtcccagacacgaaagccaaagtgcatcaaaggctaccactgctcccgaaatgcc
tacatgctggtgtacaaggtccaggaagaggagaacacagatcactccttgaccaacgtc
gaggtgccagccttccttcagaggttggtggaccaagacaaccacaaatttgaggagtgg
tgcaatgagatggccgacatgagaaaacagagcgttgataagggcaaagccaagcatgag
gaggtgaaagagctctacgagcttttacccgcaaaagacggcgagccgtatgagttcatc
cccctggagtggttgaagaagtggctagaggactccactgccacaaaagagatcaacaac
tccctctttctttgttgtcatggcaaactgcacccagacagggtggcagactccaagaga
gtttcccttcaagctgctcaactcctctacgagcgctacggaggagggccgaggatggac
ggctcgtctctttgtagagagtgtgttggccagcgatgcagagtgctgcggctgaagaac
cagctcaatgaagactacaaggaagtgaccaaccttgtgaaacgcacgctcagtggtgag
ggttactgggtgggcaaagcatctctgcgtagctggaggcagttggctttagaacaacta
gaggaggacgagcacgaaaccaaacacagcaacggccagaccaacggacagggaccacac
aaagagtttggctcagagctgtcggagggcaacggggacgagatgaagacgttcaatgaa
gatattgtctgctgtcacggagctctgactattttggagactgaaagaaagctggtatct
tctgaagtttggaccaagctgagggaatatttccccaaagccccagaattcacccaaatc
caagagtcgtgtcagcagtgcctgacgttagagcaggaggaaaaggacaatgaggcggtg
agtaagatgatggccctggaccagaagaaccaactactcaacctcttcaatgagaagaac
cggccaacactcaacaagtggccagaggaaacagacgtactttacatcgtccctctgttt
tttgtggatgagtggcgaaaattcatcaggaggcccactaaatcctctccggtgtctaat
gtgggcaacactctgctgctgtgtccccacggaggattcatgttcacctacgactcgctc
atcaacggagatggacaacatgtagctgtgctgtggcccagcgaatgggaagtgatcagc
aggctcttcatcgttgaccagccaatctccatccactgcttcagagagacctcactgagt
gatgccaccacgcagtacactactcagcctgatatctgttgggagtgcagagagagcttc
ctcttccagcagcagagggacctccgagagtacactcaagccaccatctacattcgcaaa
gtcatcgaagaccagaggatgacaaaggaggcggctccggagctcaacgccagcagctca
gagacggaggaggacaaggaagaagttccaaaggtgaatggagagacagatttggacttc
agtcagtcccaagatggtgcgaagcgactcaagctgagtgatgatagcacagcagcctcg
gctcctgggaccaacgtgaccaagctagggggcatcaggagaagcacccggcacaggaaa
ctcagaggggagaaagccctcatcgtttcagctaatcagacactgaaggagctgaaaata
cagattatgcacgccttctccgtggctccgtttgaccagaacctctccatcgatggaaag
agtctgacggatgacgcggccacattgggtagtctgggcattatccctgaaagcataatc
tgtctaaaggccgatgagccgatagcagactacgctgcaatggacgatgtctatcaggtg
agaatgcctgaagaaggatttaaaggcactgggcttctcggacactga
DBGET
integrated database retrieval system