KEGG   Pungitius pungitius (ninespine stickleback): 119230047
Entry
119230047         CDS       T07626                                 
Symbol
ubap2a
Name
(RefSeq) ubiquitin-associated protein 2a isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ppug04121]
    119230047 (ubap2a)
   03400 DNA repair and recombination proteins [BR:ppug03400]
    119230047 (ubap2a)
Ubiquitin system [BR:ppug04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    119230047 (ubap2a)
DNA repair and recombination proteins [BR:ppug03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     119230047 (ubap2a)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 GIP1_N Methyltransf_32
Other DBs
NCBI-GeneID: 119230047
NCBI-ProteinID: XP_037346899
LinkDB
Position
8:complement(18140707..18152702)
AA seq 1267 aa
MMSSLGGDKARGPREKALPPATQTSQHQKQIQATAEQIRLAQVIYDKNDADFEDKVNQLM
EVTGKNQDECMVALHDCNEDVSRAINFLLESPSDMTSWETVGKKKPLVKEGPSDSKENKE
NREKKGEREASKGRAAANRKGRGASRSRPARPEENGVEVTPVDRGSDRGRRARGGSRGSG
GRGRGRGPPGSRFSAQGMGYGAHAHSQGVSHSFSLFNPADYTSEAGSGSTQTEVWDTAAN
HITEGTVPWRGPLEDWASEDWSEDVSLSETKVFTSSCAPAAENHITPGQSLDLASLLQKP
VVGGREPPSSSSTQSLIFTNSHHHQPPQQQLPPSRNATSSTSYAHAALSSVLGAGFGDLG
QAKRPQPSAGAQILEQLKGPGLGPLPSSQAAPPASSQGSNTSICRLPGLGAPVPPPSSSS
WDIKVSESNTTTLSSQFSREFGLQPEPSLVLSQLVQRHSGPSLPLARQPSPPSQQQAPPG
SASPAAHHVSLPAQGGPGMASAGAKPPAPGAGLDPQGGSTQQQQRAQLKGLKRRMPPSSK
IPSTAVEMPGSADVPGLNLQFGALDFGSESALPEFGVVDKCAMAASRESTTAPAPGPGTQ
SQTSLYSKPLSESLGSPLSVALPLPLSSPEPVYHSSVPRASLASSSLGAASTSNTPSCSS
TASTTSPSVPSSSHYNTVGGSYDGTMPPHTRLAFSQSKEATGPVMNGLNGVRTSAALDTS
SASSTPKPDSPLNISSNGASAPSSHLQSLPAHSSSTLSNLTQDLPSASQLNSLNSHVSNH
SSLSALGSSSLAYTSVDNSSSHAPSTGPYTSSQHAALHSTHNSSHSSSGMSHLANMPNMG
NSLSGTVGGLVGASVLHSAAIAASSALGLGSNGATATSNLSAPRTTTLLSSATGKAPPNL
SQGVPPLLPNQYIMGPGGLLPAYPQIYGYEDLHMLQSRLPMPSLQDYYGITFPGPTATLS
GRDGSLANNPYTGEVTKFGRNDSTSPAPPTSLAAVQAAQAAQGQSQGQNQNQPQPPQAQP
QPQGQPQHHSSQQAFLPPGYSYTGLPYYPGVPGAVPSAAAFQYGHTMFVPPGGPGPASAK
QHSMGLGLGNPSGSPFQQQTQQQPSGYGQHAFSSGYEELTAGPAGVDYSKGYNSSSQAQA
KSTGSGPGKGVSVTSSNSGVPDISGSVYNKTQSFDKQGFHAGTPPPFSLPSALGGPGPLN
PGAAPGGYAPTPFLHILPHQQPHSQLLHHHLAQDGQGGPSQRSQSSNLQQKSQVNKSGYG
SSPYWAN
NT seq 3804 nt   +upstreamnt  +downstreamnt
atgatgagctcgctgggcggcgacaaggcccggggccctcgggaaaaagcgctgcctcct
gccactcaaacatcacaacaccagaaacagattcaggctactgccgagcaaatccggctt
gcccaggtgatctatgacaagaatgatgccgactttgaggacaaagttaaccagctgatg
gaagtgaccgggaagaaccaggatgagtgcatggtagcactccacgactgcaacgaggat
gttagcagagccatcaactttctgctagagagcccctcggatatgacctcatgggagact
gtaggaaagaagaagcccctggtgaaggagggtccatcggacagcaaggagaacaaggaa
aacagggagaagaaaggagagcgggaggccagcaagggccgtgcagcggccaaccgcaag
ggcaggggcgccagtcgcagtaggccggcgcgtccagaggagaacggagtggaggtgacg
ccagtagacagaggttcagatcgaggtcgcagggccagaggtgggagccgaggttctgga
ggtcgaggcagaggcagaggaccaccagggagccggttctcagcccagggcatggggtat
ggtgcacatgcacactctcagggggtttcacattcctttagcctcttcaatccagcggac
tatacctcggaggctgggtcagggagcacacagactgaggtgtgggacacggcggccaac
cacatcacagaagggacagttccctggaggggccccttggaagactgggcgtctgaggac
tggagcgaggacgttagtctctcggagaccaaagtgttcacctcctcgtgtgcacctgcc
gctgagaaccacatcacgcctgggcagagtctggacctcgcctcgctgctgcagaagcct
gtagtcggaggaagagagccaccttcctcctcttccactcagagtctgatcttcacgaac
tcccaccaccaccagccaccgcaacagcagcttccccccagtcgcaacgccaccagtagc
actagctatgctcatgctgctctgtcgtcagttctgggagctggttttggggacctgggg
caggccaaaaggcctcagcccagcgctggagcccagatactggaacagctgaagggccct
ggcctgggtccgctgccttcttcccaggccgcgcctcctgccagctctcaaggaagcaac
acttccatttgccgactgccaggcctgggagcccctgtacctccaccctcctcatctagc
tgggacataaaggtttcggaatccaacaccaccacgctgtcctcgcagttcagccgtgag
tttggcctgcagccggagccttctctggtgctgagccagctggttcagaggcacagcggc
ccatccctgccactggcacgtcaacccagtcctccatcgcagcaacaagcgcccccaggt
tcagcctcgcccgccgcccaccatgtcagcttgccggcacagggcggtccggggatggct
tctgccggtgctaaacctcctgcccctggcgcagggctggaccctcagggtggcagtaca
caacagcagcaacgggcacagctcaaaggcctgaaacgaaggatgcctccctcgtcgaag
atcccctccacagcggtagagatgccgggctctgctgacgtccctgggttgaacctccag
ttcggagctctggacttcggctcggagtccgcgttgccagagtttggggttgttgacaag
tgtgcaatggcagcatccagggagtccacaacggcccctgcaccgggaccagggacacag
agccaaaccagcctgtattccaaacccctcagtgagtccctgggcagccctctctctgtg
gccctgcctctgcctctctcgtcaccagagccagtgtatcactcctcggtgccgagggcc
agcctcgcttcctcctcattaggagccgccagtacctcaaacaccccctcatgttcttct
acagcctccaccacctctccttctgtaccctcctcctctcactacaacacagtgggggga
agttacgatgggaccatgccccctcacacacgactggccttttcccagagtaaagaggcc
acagggccagtcatgaatggtctgaatggtgtaaggacctctgctgctctagacacttca
tcagcatcctctaccccgaagccggattcgccgttgaacatcagcagcaacggcgcctcg
gcaccctcttcccacttacaatccctgcctgcacacagctccagcacgctctccaacctg
acccaggacctgccctcagccagccaactcaactctctcaacagtcatgtcagcaatcat
tcctcgttgtcagctctgggctccagctccctcgcttacaccagtgttgacaacagcagc
tcccacgctccttccacgggcccctacacgtcatcgcagcacgcggcactccactcgacc
cacaacagcagccacagtagcagcggcatgagccacctggccaacatgcccaacatgggc
aacagcttgagcggcacagtcggaggcctcgtcggcgctagtgtgcttcactctgctgcc
attgccgccagctcagcgctgggacttggctccaatggagctaccgccacgtccaacctc
tctgcaccaaggaccaccaccctgctctcctctgccactggtaaagcgccccctaattta
tcccagggggtgcctcctctgctgcccaaccagtacataatgggcccgggggggctgctt
ccagcgtacccacagatctacggttacgaagacctccatatgctacagtccagactgcca
atgccctctttgcaggattactatggaatcacattccctggccccacagcgactctctct
ggcagagacgggagcttagccaacaacccctacacaggggaagtcacaaagtttggcaga
aatgactccacttccccggcgcccccaacgagcctggcggccgtgcaggctgcacaggct
gctcagggccagagccagggccagaaccagaaccagccgcagcccccccaggcgcagcca
cagccccagggccagccgcagcaccacagcagtcagcaggcctttctgcctccaggctac
agctacacgggcctgccttactaccccggggtgcctggtgccgtacccagtgctgctgcc
ttccagtacggccacaccatgtttgttccccctgggggcccgggaccggcctcagccaag
cagcacagcatgggcctgggtctgggaaacccctcggggagccccttccagcagcagaca
cagcagcagcccagtggctacggccagcacgccttcagctcaggatatgaggagctgacc
gcggggccagcaggagtggactacagtaaaggatacaactcctcctcacaggcacaagcc
aaatccactggttctgggcccggaaaaggtgtctcggtgacttccagtaactccggtgtg
ccagacatcagtggaagtgtttacaataagacccagtcttttgataagcagggtttccat
gcggggacccctcctcccttcagtctgccatcagcactggggggtccggggcctctgaac
cccggagcggctcctgggggctatgcgccgaccccattcctccacatcctgcctcaccag
caaccgcactcgcagctgctgcaccaccatctagctcaggatggacagggtggtccgagc
cagcgcagccagtccagcaacctgcagcagaagagccaagtcaacaagtcgggctatggc
agctccccctactgggccaactga

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