Pungitius pungitius (ninespine stickleback): 119230049
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Entry
119230049 CDS
T07626
Name
(RefSeq) C-myc promoter-binding protein-like isoform X2
KO
K20163
DENN domain-containing protein 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119230049
Membrane trafficking [BR:
ppug04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119230049
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
119230049
NCBI-ProteinID:
XP_037346905
LinkDB
All DBs
Position
4:25268446..25297374
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AA seq
1888 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKSAKPRAPITDVAVVIRSLGEEVP
PGFTCVEETPGGHSADLNNGGLMAPQIFLCYRRGRDKPPLTDLGVLYEWKERLMPGCQLI
QTTASGRPANVSGNSSQRVYVTYRRAPESRPHSALAVTDVCVIIPSKGEAPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNMIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATM
ECWPATTKYSLPVFSTFVLTGASADKVYGAAIQFYEPFPEECLSDQQRSQLGLLGPDPQP
PCTTAPTAPTTSTAPTALTRSVHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHALPM
EKHICHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSVLLQNLGPENA
VTLLVFAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCP
FIVGVDSRYFDLYDPPPDVSCVDLDTSTIFHNEDKRALTWKILPKKACKNLMNVLNLLYQ
QLLDGQQRCDGQLELSASSELSCGRSLQALELEIQEAFLRFMAGILKGYRSFLRPITQAP
SEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDC
VDKLYNSERSGDKGGKVEGERAEESRLIETDESQRSEHTVFITPPELPPLPEGAEHPLCY
RYDGFPVLSLDLFDPLEGLRTPTSRLAARHSCPTSPAPMFRRTKQEIKSAQKIARKYSSV
PQLWSKCLLRHCYGLWFICLPAYVQVCHSKVRALRTAYDVLRKMQVKKLQPPDEVCYRVL
MQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSRTRGGYFLWMKLRN
VVLGVAQFKRALRRHAPITQNPLSDGSDLDAVSQASLEISADAPLARVDPADDGSSTGDQ
SDLGYNSLSKEEVRRGAADHKKESDCSSLSESDSTKGSKDLLPQLDTELHSSFRPRGIVR
SSCPYSDASCKPRSSASAGHVAGLLFTSSLGEIGEVRSDSLLRRHVVGGASGPDWQAARG
RRLSGDMAGGGVLDRGEAGQLGADVKILSAASFSERPRSLAVGGASCREGHEEGRDSSDE
DRANADTIFDLEDLDLDKPPAGGARRAVERSVSYGGSVRRTDIRAGYDPLSLLAAERRPH
EDRYPGGGEVGTPSARGHLAREIELYMNHMGSPLSSRTPSLDLQDDGGPLPPPPAPLSGP
RRASLPHGSPLRAAGVPRSRTFHPPSPSRPVPRQRLQSSPSWRSSGTTTPSASPRPSPRP
SPRPSPRRDRAERGSLASPSSSSFALDTLLTPTLDVFRSSVFSGVAEKASRWYSRLSTYT
TPTKDAHSDLLGDPDRSSLLDEEASEGTVTSPQRNGPPGPRRRSPRRSVLDSTSPLGRPT
SLLPGCVFSPPGFPLSDQSDLGSSHCTSNTSSFNNYAMELLISSCSRCKTCDCLVYDEEI
MAGWTADDSNLNTTCPFCGNPFLPFLHVEVRDLRGPGRLFLKGSASVKEATTSSCSASTG
LDTGTSTLSTPCPTTAVFPPSPEGPGSRRSRPSRAQGISIPPPAPGAPMARSASAFGPLD
GAPRLHRGVPASGSLPSRLNDTTDPLNMEWRLHHPEPVTVPYLSPLVLWKELESLLENEG
DPVITEGDVVDQHPIIYWNLVWYFRRLDLPSNLPGLMLTSEHCNRGSQVPRHWMSEDSKH
VLIQMLWDNLKLHQDSVQPLYILWNTFNVGYPLTWPVPEEEKPFSEELLQSVVRSIQKND
VGRPMAQLLQLLADTLGVKRQRSLYRDVLFLSLVALGKDNIDIDAFDREYKSAYDRLAPA
LVKLTHNCDRPPGTGVMECRRTFGEPYL
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaagggcctcgtgtagccgactacttcgtggtggccggtctgacggac
ccgtccaagccgctggaccaggagatccactttgacgacgtctgccacaagtcggccaag
cccagggcgcccatcaccgacgtggcggtggtgatccgctccttgggcgaggaggtgccg
ccgggcttcacctgcgtggaggaaacgcccggcggccactcggcggacctcaacaacggc
ggcctcatggcgcctcagatcttcctgtgctacaggcgaggccgagacaagccgccgctc
accgacctgggcgtgctgtacgagtggaaggagcgcctcatgccgggctgccagctcatc
cagaccacggcctcgggtcgccccgccaacgtcagcggcaactcctcccagcgcgtctac
gtcacctaccgccgggcgcccgagagccgcccgcactccgccctcgccgtcaccgacgtc
tgcgtcatcatccccagcaagggggaggcgcccccccacaccttctgcaaggtggagaag
aacctcaacagcagcatgtggggctcctccgtctacctgtgctacaagaagtctgtggcc
aagaccaacatgattgcctacaaagcaggtctattcagcaggtatccggaggaggactac
gagtccttccctctgcccgagtccgtccccctcttctgcctccccatgggggccaccatg
gagtgctggcccgccaccaccaagtactccctccctgtgttctccaccttcgtcctcacc
ggggcctccgcagacaaggtctacggagcggccatccagttctacgagcccttccctgag
gagtgtctgagcgaccagcagcgctcccagctgggtctgctgggccccgacccgcagccg
ccctgcaccaccgcccccaccgcccccaccacctccaccgcccccaccgccctcacgcgc
tcggtgcacaccaacaagtgcatctgcctgctctcccattggcccttcttcgacgccttc
cgcaagttcctcacattcctctaccgctactccatctccggcccccacgcgctgcccatg
gagaagcacatctgtcatttcatgcacaaagttcccttcccttcctctcagaggcctcgc
attctggtgcagctctccccccacgacagcctgatgctcagccagccggtgtcgtctcct
ctgccgctcagcggcgggcggttttccgtgctgctgcagaacctgggcccggagaacgcc
gtcaccctgctggtgttcgccgtcaccgagcacaagatcctggtccactcgctgcggccc
gccgtcctgaccagcgtcaccgaggccctggtgtctatgatcttcccgttccactggccc
tgcccgtacattcctctgtgcccgctggcgttggccgacgtgttgagcgccccctgtccc
ttcatcgtgggggtggactcccgctactttgacctgtatgaccccccgcccgacgtgagc
tgcgtggacctggacaccagcaccatcttccacaatgaagataagcgagccctcacctgg
aagatcctgcccaagaaggcctgtaagaacctgatgaacgtgctgaaccttctctaccag
cagctgctggacgggcagcagcgctgcgacgggcagctggagctcagcgcctcctcggag
ctgagctgtgggaggagcctccaggcgctggagctggagatccaggaggccttcctgcgc
ttcatggcgggcattttgaaaggctaccgctccttcctgcgacccatcacccaggcgccc
tcggagaaggccacggacgccagctcgctctttgacctgcaagggttcctgaagagccgc
gaccgctcacaccagaagttctactcgctgatgaccaaaacccagatgttcatccgcttc
attgaggagtgctccttcgtcagcgacaaggacgccagcctggccttcttcgacgactgc
gtggacaaactgtacaattcagagcgaagtggagacaaaggaggaaaggtggagggcgag
cgagcagaggagagccggctgatcgagaccgacgagtcccagcgcagcgagcacacggtg
ttcatcacgccccccgagctgccccccctccccgagggggcggagcaccctctctgctac
aggtacgatggtttccccgtgttgagtctggacctgttcgaccccctggagggcctcagg
acccccacctcccgcctcgctgccaggcacagctgccccacaagccccgcccccatgttc
agacgaaccaagcaggagatcaaatcagcccagaagatagccaggaagtactcgtccgta
ccccagctgtggtccaagtgcctcctgcgccactgctacggcctgtggttcatctgcctg
ccggcctacgtgcaggtctgccactccaaggtgcgggcgctccgcacggcgtacgacgtc
ctgcggaagatgcaggtcaagaagctgcagccccccgacgaggtctgctaccgggtgctg
atgcagctctgtggacagtatggacaacccgtgctggcagtgcgggtcctctttgagatg
aagaaggccggagtgcatcccaatgccatcacctacggctactacaacaaggccgtgttg
gagagcacgtggccctccagaaccagagggggctacttcctgtggatgaagctgaggaat
gtggttctgggcgtggctcagttcaagcgggcgctacgtcggcatgctccgattacccag
aatcctctgtcagacggcagcgacctggacgccgtgagtcaggccagcctggagatctcc
gccgacgcccccctggcccgggtcgacccggccgacgacggatccagcacaggggaccaa
tcagatctgggctacaactctctgtccaaagaggaggtccggagaggagctgcggaccac
aagaaggagagcgactgcagctccctgtcggagtcggacagcaccaaggggagcaaggac
ctcctcccccagctcgacacggagctccactcctccttcagaccccgcggcatcgtgcgc
agcagctgtccctacagcgacgcctcctgcaaacccaggagctccgccagcgcaggccac
gtggcgggcctcctcttcacctcctccctgggggagatcggcgaggtccgcagcgacagt
ctgctgaggagacacgtggtgggcggggcctcgggccccgactggcaggcggcgaggggc
cggcggctgagcggcgacatggcgggcggcggcgtcttggaccggggggaggcggggcag
ctcggcgccgacgttaagattctttccgccgccagcttcagcgagaggcctcgctcgctg
gctgtgggcggggcgtcctgcagggaggggcacgaggaggggcgagactccagcgacgag
gaccgggccaatgcggacaccatctttgatctcgaggacctggatctggacaaacccccc
gcggggggggcgaggagggcagtggagcgtagcgtcagctacggcggctccgtgaggcgc
acggacatccgggcgggctacgacccgctgtccctgctggcggcagagcgccggccccac
gaggaccgttaccctggggggggcgaggtcggcacgccgagcgcccgtgggcacctggcc
cgggagatcgagctctacatgaaccacatgggcagcccgctgagcagccgcacgcccagc
ctggacctgcaggacgacggcggcccgctgcccccccccccggccccgctctcgggcccc
cgcagggccagcctgccccacggctcccccctcagggccgccggagtgccgcgctcgcgc
accttccacccgccctcgccctcccggcccgtgccgcgccagcgcctgcagtcctcgccg
tcctggcgcagctccggcaccaccacgcccagcgccagcccccgccccagcccccgcccc
agcccccgccccagcccccgcagggacagggcggagcggggcagcctggcgtcgccctcc
tcctcctccttcgctctggacactctgctcacgccgacgctcgacgtgttcagaagcagc
gtgttctcgggcgtggcggagaaggcgagccgctggtactcgcgcctgtccacgtacacc
acgcccaccaaggacgcccacagcgacctcctcggggatccggaccgctcctcgctgctg
gacgaggaggcctccgagggcaccgtcacctcaccgcagaggaacggccccccggggccc
cgcaggaggagcccccgacgcagcgtgctggacagcacctcccccctggggaggcccacg
tcgctgctccctggatgcgttttctcgcctcccggcttccctctgagcgaccagtcggac
ctcggctcctcccactgcaccagcaacaccagcagcttcaacaactacgccatggagctg
ctgatctccagctgctctcgctgtaagacgtgcgactgcctggtgtacgacgaggagatc
atggccggctggacggcggacgactccaacctgaacaccacctgtcccttctgtgggaac
cccttcctgcccttcctccacgtggaggtccgggacctgagggggcccggcaggctcttc
ctgaagggcagcgcgtcggtgaaggaggccacgacctcgtcgtgctccgcctccacgggt
ctggacacgggcacctccaccctgtccaccccgtgtcccaccacagccgtcttccccccc
tcccccgagggtccggggagcaggaggagccgacccagcagagctcagggcatcagcatc
ccccccccggcccccggggccccgatggcccgcagcgccagtgccttcggccctctggac
ggggcgccacgcctccaccgcggcgtgcccgcgtcgggcagcctgcccagccgactgaac
gacaccacggacccgctgaacatggagtggcggctgcaccaccctgagccggtgacggtg
ccctacctgagcccgctggtgctgtggaaggagctggagagcctgctggagaacgagggc
gacccggtgatcacggagggcgacgtggtggaccagcaccccatcatctactggaacctg
gtctggtacttcaggaggctggacctgcccagcaacctgccgggcctcatgctcacctca
gagcactgcaaccggggctcgcaggtccctcgtcactggatgtccgaggacagtaagcac
gtgctgatccagatgttgtgggacaacctgaagctccaccaggactcggtccagccgctc
tacatcctctggaacaccttcaatgtggggtaccctctgacctggccggtccccgaggag
gagaagcccttcagtgaggagctgctgcagagcgtggtgaggagcatccagaagaacgac
gtgggccggccgatggctcagctgctgcagctgctggcggacacgctgggggtcaaacgg
cagaggagtctgtacagagacgtcctctttctctccctggtggctctggggaaagataac
atcgacatcgacgccttcgaccgcgagtacaagtcggcgtacgaccgcctggcgccggct
ctggtgaagctgacccacaactgtgaccgcccccccggcaccggggtcatggagtgccgc
aggacgtttggagagccttacctgtaa
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