Pungitius pungitius (ninespine stickleback): 119230124
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Entry
119230124 CDS
T07626
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119230124 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119230124 (nelfcd)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
119230124 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
119230124
NCBI-ProteinID:
XP_037347033
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All DBs
Position
8:15484760..15490716
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AA seq
578 aa
AA seq
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MDEEYYSGARDWEGTGEGPTDYVEGENDGKIQEECLQKFSSRDYIMEPAIFNTLKTYFQL
GGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQKA
DSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVS
TACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILSQEE
QGGSAVRRIGQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADITV
LFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWKK
NKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELGTLYQCIRFPVVAMGVLKWVD
WTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLEL
KKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQL
FLPILENDSIAGTIRTEGEHDPVAEFIAHCKSNFIMIN
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggagtattacagcggcgcacgagactgggaaggcacgggggaaggtcccacg
gattatgtggaaggagaaaatgatgggaaaatccaggaagagtgccttcagaagttctcc
agcagggattacatcatggagcctgctatcttcaacacccttaaaacctatttccaattg
ggaggctctccagaacacgtcattcagcttctctctgaaaactactctgctgtggctcag
accgttaatctgctggctgagtggctcatccagatgggtgtggagcctgctcaggtccaa
gaacgagtagaaaatcacctcaaaagtctcctgataaaacactttgacccccaaaaggct
gattccattttcaccgttgagggagagacccctgcctggctcgagcagatgatcgcacac
actacgtggagagatcttttctataagctggcagaggctcacccggactgcctgatgctt
aacttcactgtgaagctcatttcagacgcagggtatcagggggagatcaccagtgtgtcc
acagcgtgccagcagctggaggttttctcccgggtgttgaggacatccttggccactctg
ctggatggaggagaagaaaacctggagaaaaacctgccagaatttgctaagatggtgtgc
cacggcgagcacacctacctctttgcccaagcgatgatgtccatcctctctcaggaggaa
cagggtggttcggcggttcggaggatcggccaggaggtgcagaagtcagcgcatgagagg
gggcacgatgccagtcagataacccttgcgctgggcacagcagcagcctacccccgggcc
tgccaggcactgggtgccatgttgtctaaaggagccctaaatcctgcagatatcaccgtt
ctgttcaagatgttcagcagcatggacccgcctcctgtggagctgatcagagtgcctgcc
tttctggacttgttcatgcagtcactgttcaagccggggtcaaagataaaccaggaccat
aagcacaaatacattcacatcttggcctacgcagccagtgtggttgaaacgtggaaaaag
aacaagcgagtcaacatcaataaggatgagctgaagtcgacgtccaaggccatagagact
gtgcacaacctgtgctgcaacgagaacaaaggagccaccgagctggtggctgaactcggc
acgctgtaccagtgcatccggtttccagtggttgctatgggggttttgaagtgggtggat
tggaccgtgtctgagccgcggtactttcagctgcagacagaccacactccagtgcattta
gctttgctggacgagatctgtacatgtcaccagctgctgcacccgcaggtcctccagctg
ctcatcaagctctttgagacggagcactctcagctggatgtcatggagcagctggagttg
aagaagacactgctggatcgaatggttcacttgctgagccgcggctacgtccttcccgtc
gttggttacatccgcaagtgtctggagaaactcaacacggacatctctctcattagatat
tttgtcactgaggtgctggatgtgatcgcaccgccttacacatctgactttgttcagctc
ttcttgcccattctggagaacgacagcatcgcaggaacaatccgcacagagggagaacac
gaccctgtggcagagttcatcgctcattgcaagtcaaacttcatcatgataaactga
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