Pungitius pungitius (ninespine stickleback): 119230172
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Entry
119230172 CDS
T07626
Name
(RefSeq) retinoic acid receptor gamma-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119230172
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ppug03310
]
119230172
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119230172
Nuclear receptors [BR:
ppug03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
119230172
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Ribosomal_60s
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
119230172
NCBI-ProteinID:
XP_037347116
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Position
8:15151451..15177247
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AA seq
498 aa
AA seq
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MATNREHHMRHMTGFPRAMYPFTFNSMRSHSPFDLLASSHLFGRFGTDLPKEMAALSVET
QSTSSEEMIPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPENYELSG
ELEELVNKVSKAHKETFPSLGQLGKYTTNSSADHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTELVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQKVDKLQEPLLEALKIY
TRRRRPNKPHMFPRMLMKVTDLRGISTKGAERAITLKTEIPGPMPPLIREMLENPEAFED
SSDSGDSAAAAPPAIQAIKQEEKATDESAVEEEEEEEEEDDDDDYWDEEKDRGVDSDGEL
LVEAAGGGLKKGVTGKTQ
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaacagggagcaccatatgcgtcacatgaccggcttcccccgagcgatgtac
ccgttcaccttcaactccatgcgtagccactcccccttcgacctgctggccagcagccac
cttttcggccggtttgggacggaccttcctaaagagatggctgcattgtcggtggagacc
cagagcaccagctcagaggaaatgatccccagctctccttctcctcctcctccgccccgc
atctacaagccgtgctttgtgtgccaagacaagtcatctggttaccactatggagtgagc
tcctgtgagggctgcaagggtttttttcggcgcagtatccaaaagaacatggtgtataca
tgccacagagacaagaactgccagatcaacaaagtgactcgcaaccgctgccagtactgt
cggctgcagaagtgctttgaggttggcatgtccaaagaagcggtgcgtaacgacaggaac
aaaaagaagaaggacgtgaaggaggaggtggtgctgccagagaactacgagctgagtgga
gaactagaggagctggtcaacaaagtcagcaaagctcacaaagagacctttccctctctg
ggacaactcggaaaatacaccacaaattcaagtgctgaccacagagtacagctggacttg
ggcctgtgggataagttcagtgagctgtccacaaagtgcattataaagatcgtggagttc
gccaagcggcttcctggcttcactacgctcaccatcgctgaccagatcaccctcctcaaa
tccgcatgcctggacatcctgatgctgaggatatgcactcgctacaccccagaacaggac
accatgactttctcagatggcctaacactcaataggacccagatgcacaacgctggcttt
ggccccctgacagagctggtgtttgcctttgctggccagctgctgcctttggagatggat
gacacagaaacgggcctactcagcgccatctgcctgatctgcggagaccgcatggatctg
gaggagccacagaaagtagacaagctgcaggagccgctgctggaggctctgaagatctac
acccgccgcagacgcccaaacaagcctcacatgtttccccgcatgctgatgaaagtcaca
gacctccgaggaatcagcaccaaaggcgcagagcgagccatcacactgaagaccgagatc
ccgggccccatgcctccactcatccgggagatgctggagaaccccgaggccttcgaggac
agcagcgactccggggacagcgccgcagccgcgccccccgcgattcaagccatcaaacaa
gaggagaaggccacggacgagtcagccgtcgaggaggaggaggaggaagaggaggaggac
gacgacgacgactactgggacgaggagaaggaccgaggggtggacagtgatggggagctg
ctggtggaggcggcaggcggcgggctaaagaaaggtgtaactgggaaaacgcaatga
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