KEGG   Pungitius pungitius (ninespine stickleback): 119230187
Entry
119230187         CDS       T07626                                 
Symbol
wdr1
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ppug04990]
    119230187 (wdr1)
Domain-containing proteins not elsewhere classified [BR:ppug04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   119230187 (wdr1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st eIF2A Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_RIG_1st Beta-prop_SPT8 Beta-prop_WDR11_1st Beta-prop_NUP159_NUP214 WD40_RFWD3 BBS2_Mid WD_LRWD1 DUF5711 Beta-prop_ELP1_1st Beta-prop_DCAF12 DUF7165 HPS3_N
Other DBs
NCBI-GeneID: 119230187
NCBI-ProteinID: XP_037347146
LinkDB
Position
8:18321410..18328668
AA seq 606 aa
MSHELKHVFASLPQMERGVAKVIGGDPKGNNFLYTNGKCVIIRNIQNPAIADIYTEHAHT
VTVAKYSPSGFYIASGDVSGKIRIWDTTQKEHILKYEYSPLSGKVKDIAWTEDSKRMAVV
GDGREKFGSVFLWDTGSSVGDLSGHSKLINSVDIKQTRPYRLVTGSDDTCGSFFKGPPFK
FEFTLHDHNQFVNCVRFSPDGNLFVTAGADGQIFLHDGKEGTLISTLGGEKAHKGGIYAV
SWSPDSSQLISASGDKTVKLWDVGAGTAVTTFNLGTEVTDQQLGCLWQNDHLLTISLSGY
INYLDKNNPNRPIRTIKGHSKSIQCLTIHKKDGRPYIYSGSHDGHINYWDAETGENDCFS
GKGHSNQVSQMVIGQASELVTCSMDDTLRYTNLNKTEYSASDVVKMDFQPKSVSAATGGL
SLAVCIGQIVLLKDKKKVFTLDNLDYEAEVGAIHPGGTVAVVGGADGDIRLYSIQGNTLK
YEGQTIKATGAVTAMAYSNDGAYLAVIDDKKVATAFTVADGYSVKNEFYGHHAKPVTLAW
SPDNEHFATGGMDMMVFIWTISDPDKRVKISDTHRLHHVSGLAWVDEHTLVTTSHDASIK
QWTITY
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgtcacatgaactgaaacatgtgtttgccagtctccctcagatggagaggggagttgcg
aaagtgattggtggcgatccaaaaggcaacaacttcctgtataccaatgggaagtgtgtc
atcatcaggaacatccaaaatccggcaatagcagacatctacaccgaacatgctcatacg
gttactgtggccaaatattcgcccagtggattctacattgcatctggagatgtatcagga
aagatccgtatctgggacaccacccagaaagagcacattctcaagtacgagtacagccct
ctttctggtaaagtcaaggacattgcgtggaccgaggatagcaagaggatggctgtcgta
ggggacggccgagagaagtttggatccgtgttcctgtgggacactggctcctcagtcggg
gatctctccggccactccaaattgatcaacagtgtggacataaagcagacgcgtccttac
cgcctggtcaccggcagtgatgacacgtgcgggtctttcttcaagggacctcccttcaag
ttcgagttcacactacatgaccacaaccagtttgtcaactgtgttcgtttctctccagat
gggaatctgtttgttacagctggtgctgatggccagattttcctccacgatggaaaggaa
ggtacacttatttccacactgggtggcgagaaagcccacaaaggaggaatctatgctgtc
agctggagccctgacagctcccaactgatctctgcctcgggggacaagaccgtgaaactc
tgggatgtcggtgcaggcactgccgtcaccaccttcaacctgggcactgaagtgacagac
cagcagctgggctgcctgtggcagaatgaccacctcctcacaatctccttgtcaggatac
atcaactacttggacaagaacaaccccaaccggcccatacgcacgatcaagggtcacagc
aaatctatccagtgtctgactattcacaaaaaggacggacgaccatacatctactcgggg
agccacgatggacacatcaattactgggatgctgaaactggggagaacgattgcttctca
gggaagggccacagcaaccaggtgagccagatggtgatcggccaagccagcgagctggtg
acgtgcagcatggatgacacactgcgctacaccaacctcaacaagactgagtacagtgct
tctgatgtggtgaagatggatttccagcctaaaagcgtgtctgcggctacaggagggctc
tcactggctgtgtgcattggccagattgtcctgctaaaggataagaagaaagtctttaca
ttggacaatctggactatgaagccgaggtgggagctatccatcctgggggcaccgttgca
gtggtgggaggcgcagatggggacatccgtctgtactcgattcagggcaacactctgaag
tacgagggtcagactatcaaggctacaggcgcggtcacagccatggcctactccaacgat
ggagcctatctggctgtcatcgatgataagaaagttgccaccgctttcactgtggctgac
ggctactcggtcaaaaatgagttctatggacaccatgccaaaccagtgactttggcatgg
tcacctgacaatgagcactttgcgactggtgggatggacatgatggtgttcatttggaca
atttctgatccagacaagagggtcaagatctcagacacccaccggttgcaccacgtcagt
ggcctggcttgggtggatgagcacactctggtcaccacctcccatgatgccagcattaag
cagtggactattacatactga

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