Pungitius pungitius (ninespine stickleback): 119230190
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Entry
119230190 CDS
T07626
Symbol
cars1
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119230190 (cars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppug01007
]
119230190 (cars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119230190 (cars1)
Enzymes [BR:
ppug01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
119230190 (cars1)
Amino acid related enzymes [BR:
ppug01007
]
Aminoacyl-tRNA synthetase
Class I (G)
119230190 (cars1)
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119230190 (cars1)
Prokaryotic type
119230190 (cars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
DUF5772
Motif
Other DBs
NCBI-GeneID:
119230190
NCBI-ProteinID:
XP_037347156
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All DBs
Position
4:25236196..25248771
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AA seq
745 aa
AA seq
DB search
MATSAEPVKGKRVQPPWSPPAGTDVPSLHLYNSLTRAKEPFVPQRGNRVTWYCCGPTVYD
ASHMGHARSYISFDILRRVLKDYFKYDVLYCINITDIDDKIIRRARQNHLLDQYKKKQPK
AAQILQDVLSAREPFKAALASTTDPDKKQMMERLDAAVSAALLPLQAAAEGKAAHQVVQP
LAEVLLENSKDLLSDWLDEQFGSEVTENSIFSILPSYWEGEYHRDMEALNVLPPDVLTRV
SEYVPEIVEFVRRVVSNGYGYESNGSVYFDTLKFDGSPQHSYAKLVPEAVGDQKALQEGE
GDLSISADRLGEKKSSKDFALWKASKPGEPSWDSPWGKGRPGWHIECSAMAGSILGESMD
IHGGGFDLRFPHHDNELAQSEAFFQNDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL
EKNTARQLRLAFLMHSWKDTLDYSSNTMESAVQYEKFMNEFFLNVKDILRAPTDITGRFE
KWEGPEMELNNSFYDRKSAVHEALCDNVDTRTAMEEMRVLVGLSNGYIAGRKGAKLRPNR
MLLEGIAAYLTGMLKVFGAIEGSEPIGFPVGGPSQNIDLESTVMPYLSVLSDFREGVRRI
AREQKVTELLQLCDVVRDDTLPELGVRLEDHEGLPTVVKLVDKETLLKEREEKKQMEAEK
KKKKEDAARRKQEQEMLKLAKMKVPPGQMFRTETEKYSKFDETGFPTHDAEGKELSKGQA
KKLRKLFEAQEKLHNDFLQMNLSGD
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttcagcagagccagtgaaagggaagcgtgttcagccgccctggtctcctcca
gcagggacagatgttccttcccttcacctctacaacagcctgaccagagccaaggagccg
tttgttcctcagagggggaaccgggtgacgtggtactgctgcggcccgacggtctacgac
gcctcgcacatgggacacgccagatcctacatatcttttgatattctgcgaagggtactg
aaggactactttaagtacgatgttctttactgcataaacatcacagacatcgacgacaaa
atcatcagaagggcccggcagaaccacctcctggaccagtacaagaagaaacagcccaaa
gctgctcagatactgcaggacgtcctgagcgccagagagccctttaaggccgccctggcc
tccaccaccgacccggataagaagcagatgatggagaggctcgacgccgccgtctccgcc
gctctgctgcccctgcaggcggcggccgagggcaaagccgctcaccaggtcgtgcagcct
ctggccgaggttctgttggagaactctaaggatctgctctctgattggctggacgagcag
tttgggagtgaagtcacagagaactccatcttctccatcctccctagttactgggagggg
gagtaccacagagacatggaggccctgaacgttcttcctccagacgtgctgactcgagtc
agcgaatacgtgccggagatcgtggagttcgtgaggagggtcgtctccaacggttacggg
tacgagtccaacggctccgtctacttcgataccctgaagttcgacggcagcccgcagcac
tcgtacgccaagctggtgccggaggcggtgggcgatcagaaggccctgcaagaaggagaa
ggtgacctcagcatctccgccgaccggctcggtgagaagaagtcctccaaggacttcgcc
ctgtggaaagcctccaagcccggggagccttcgtgggactccccgtgggggaaggggagg
cccggctggcacatcgagtgctcggcgatggccggctccatcttgggggagtccatggac
atccacgggggggggtttgatctccggttcccccatcacgacaacgagttggctcagtcc
gaggctttcttccagaacgactgctgggtccgatacttcctgcacactggacacctgacg
atcgcaggctgcaagatgtccaagtctctgaagaacttcatcaccattaaagacgccttg
gagaagaacacagctcgtcagctgcgtctggccttcttgatgcactcctggaaagacacc
ctggactactcctccaacacgatggagtcggccgtccagtacgagaagttcatgaatgag
ttcttcctgaatgtcaaagacatcctgcgagctccgaccgacatcacgggtcgctttgag
aagtgggaggggccagagatggagctcaacaacagtttctacgacaggaagtcggccgtc
cacgaggcgctgtgcgacaacgtggacacccgcaccgccatggaggagatgagggtgctg
gtcggccttagcaacggctacatcgccggcaggaagggcgccaagctgaggcccaaccgc
atgctgctggagggcatcgccgcgtacctcacaggcatgctgaaggtatttggggccatc
gaaggatctgagcccatcggcttcccggtgggaggaccgagtcagaacatcgatctggag
agcaccgtgatgccgtacctcagcgtactgtcagatttcagagagggagtccgaaggatc
gcccgagagcagaaagtgacggagttgctgcagctgtgtgacgtcgtccgtgacgacacg
ttaccggagctcggcgtccgactagaagaccacgaaggtctgcccactgtggtgaaactg
gtggacaaggagacattgctgaaggagagagaggagaagaagcagatggaggcggagaag
aagaagaagaaggaagacgccgccaggaggaaacaggagcaggagatgctcaaactggcc
aagatgaaggtccctccaggccagatgttccgcacagagaccgaaaagtattccaagttt
gacgaaacgggtttccccacccacgacgctgaaggaaaggagctgagcaaaggacaagcc
aagaagctgaggaagctctttgaggctcaggagaagctgcacaacgacttcctgcagatg
aacctgagcggcgactga
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