Pungitius pungitius (ninespine stickleback): 119230199
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Entry
119230199 CDS
T07626
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
ppug03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119230199 (thoc7)
09122 Translation
03013 Nucleocytoplasmic transport
119230199 (thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119230199 (thoc7)
03041 Spliceosome [BR:
ppug03041
]
119230199 (thoc7)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119230199 (thoc7)
Spliceosome [BR:
ppug03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119230199 (thoc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
OVT1
Zw10_N
OSTMP1
Peptidase_S10
Terpene_synth_C
Sec8_N
Suppressor_APC
MTR4_beta-barrel
V_ATPase_I
DUF1351
DASH_Dad2
MutS_III
Motif
Other DBs
NCBI-GeneID:
119230199
NCBI-ProteinID:
XP_037347165
LinkDB
All DBs
Position
8:complement(18483946..18486289)
Genome browser
AA seq
203 aa
AA seq
DB search
MGAVTDDEVIRKRLLIDGDGAGDDRRINVLLKSFTKWCNSPGTPDEGFTQYQRMMGILAQ
CEFSMGKTLMVYDMNLREMENYEKIYTNIEQNITSAHDKIAECKKEIQRAKRIRKNRQEY
DALAKVIQQHPDRHETLKQLEALDKELQQLSHIKENVDAKLELRKKQFHVLLSTIQELQQ
TLENDEKSDNDEIMQGSPAQNGE
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgttacagatgatgaggttattcgtaaacgtcttctcatcgacggggacgga
gctggagatgatcgccggatcaacgtgctgttaaagagtttcaccaaatggtgcaactct
cctgggactccggatgaagggttcacgcagtaccagaggatgatgggcatcctggcccag
tgtgagttctccatggggaagacgttgatggtttacgacatgaatcttcgcgaaatggag
aattatgagaaaatctacactaatatagaacaaaacatcacatctgcgcacgacaagata
gcagaatgcaaaaaagaaatccagagggcaaagagaatacggaaaaaccgacaagagtac
gatgctttagctaaggttatccagcaacacccagaccgacacgagacactaaagcagttg
gaggcgcttgataaagaactccagcaattgtctcacatcaaggagaacgtagatgcaaag
ctggagttgaggaagaagcagtttcatgtgcttctcagtaccatacaggaactacagcag
acacttgagaatgatgagaaatcggacaatgacgagatcatgcaggggagcccagcacag
aatggtgaatga
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integrated database retrieval system
