Pungitius pungitius (ninespine stickleback): 134107096
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Entry
134107096 CDS
T07626
Name
(RefSeq) LOW QUALITY PROTEIN: tapasin-like
KO
K08058
TAP binding protein (tapasin)
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134107096
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
Ig_2
C1-set
Herpes_gE
DmsC
Motif
Other DBs
NCBI-GeneID:
134107096
NCBI-ProteinID:
XP_062414415
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Position
17:complement(3889946..3893712)
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AA seq
437 aa
AA seq
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MSNMSPMYALCLVAAMCCGEVSCPVLECWFVQEKTGRGGGLTAATTLEKSLLHIQTDPHP
AESQQAPSDIHPDRVFLITDPAGTLCHRSLNPPRGSVEKPQCEINPFLPQPSTLKWASPL
TDSASSPIYLQAHWFSTAIQGLNGQLAVSTITRAATATXEHKVILSVTTTTVSVQSRLGG
PVLLDCGLWADPSSPLSGSGFAVEWRYQFRGEGRLVLAYDGKTDRLADVQEEGATLDYEG
LHQRGNASLILREAEVRHSGLYICTVYLPHLVAQVTMELQVVEPPSLSIHPSPLPLAVPG
QSLAVQCEASGFAPLGLELSWEFKGSDGRSRPLGSGSLTGHREAXDGTYSQSTRLELDST
QLDLGPGGELTCVAVHLGGPRRASVALNRIGFSSPSIEDSMAMVGVALVLYGLIKFVSWT
VTSSGSDEAGQQEKKDK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacatgtctccaatgtacgcgctgtgcctggtagcagcgatgtgctgcggtgaa
gtgtcctgtcctgtgttggagtgctggtttgtgcaggagaagacgggtcgaggaggaggt
ctcactgcagctacaaccctggagaaatcccttctgcacatccaaaccgacccccaccct
gcagagagccagcaggctccatccgacatccaccccgacagagtcttcctcatcaccgac
ccagccggcactctctgccaccgctctctcaatcctcccagaggctcagtggagaagcct
cagtgtgagatcaaccccttcctgccgcagccctccaccctcaaatgggcatctccactc
acagactccgcctccagccccatctacctgcaggcccattggttctccactgccattcag
ggcctcaacggacagctggccgtttccaccatcactcgtgctgccacggcaaccnacgag
cacaaagtgatcctcagtgtgaccactacaaccgtctccgtgcagtccagacttgggggg
ccggtgctgctggattgcggcctctgggccgacccctcgtcgcctctctccgggtcgggt
tttgccgtagagtggcgctaccagttcagaggggaggggcgcttggttctggcctacgac
ggcaaaacggaccgcctcgctgacgtccaggaggagggggccacgctggactacgagggc
ttgcaccagagagggaatgcgtccctgatcctgcgggaggctgaagtgcgtcactcgggc
ttgtatatttgtacggtgtatctgccccacctcgtggctcaggtgaccatggagctccag
gttgtagaacctccatccctctccatccacccgtcccctctgcccctcgcagtccccggc
cagtctttggcggtccagtgtgaggcgtctggcttcgcccccctcggcctggagctgagc
tgggagttcaaaggctccgatgggaggtccaggcctctggggtcgggcagcttgacgggc
caccgggaggcctgagacggaacctacagccagagcacccggctggagctcgactccacc
cagctggacctgggcccaggaggggaactcacctgtgtggctgtccatctcgggggcccc
cgacgggccagcgtggccctcaaccgcattgggttcagctccccctccatcgaggactcc
atggcgatggtgggtgtggcgctggtgctctacggtctcatcaagtttgtctcttggacc
gtcaccagctcaggctcagatgaggctggtcaacaagaaaagaaggacaagtga
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