Pungitius pungitius (ninespine stickleback): 134107196
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Entry
134107196 CDS
T07626
Name
(RefSeq) protocadherin gamma-A4-like
KO
K16494
protocadherin beta
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
134107196
Cell adhesion molecules [BR:
ppug04515
]
Cadherins
Protocadherins
134107196
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134107196
NCBI-ProteinID:
XP_062414716
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Position
2:complement(23035362..23038139)
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AA seq
809 aa
AA seq
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MMALMCITDFGGRGQSLFVILCLFKLSSVTGQARYSVPEEQAEGSFVGNIARDLGLDVAR
LLSGKARIITKESRQYVDLNRDKGTLLIKERIDREELCGKTTPCSFSFEVILENPIQLYR
VTVEVIDVNDNTPSFPKEEISLNIVENAPSGTRFSIECAFDPDVGINDIQKYILRPVDHF
KLEVQSQPDGGKSIEMVLQNPLDREKEETHSLVLIASDGGEPQRSGTVRIHITVLDINDN
APVCSQPVYKAEVRENSQKGTVVTTVSANDADKGHYGEVTFSIAHVTREVKQLFEVNVKT
GDIKVEGRLDFEKSNTYQLNVKASDQGGYSDTCKVIIQLIDENDNVPTIQLMSFVNLISE
DSPPGTTIAVINVDDVDSDGNGVVKCSIDSDMPFKIESSLTGYYTIVTDNVLDRERIPEY
NITITVSDQGSPPLTSRKHINVKVSDVNDNPPEFDQSEYSKTVPENNSPGFSVFNLSARD
ADWGQNARVSYFLEENEINGAAVSSLVSVNSESGVIHAVRSFDFEQIKVFEFNITARDAG
SPPLSSAATVRLIVQDLNDNPPQVLYPVQTGGSLVAEMVPRSADVGYLVTKVVAVDVDSG
QNAWLSYKLQKATDRALFEVGLQNGEIRTIRGVTDKDAVKQRLTVIVEDNGQPSRSATVI
VNVAVADSFPEVLSEFTDYTQDKEYNDNLTFYLVLALAVVSFLFITCLVVIISVKIYRWR
QSRVLYHSNLPVIPYYPPRYSDTLGTGTLQHVYNYEVCRTNDSRKSDCKFGTVGSQNVLI
MDPSSTGTMQRIQSEKNILDEPDSPLEVS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgatggctcttatgtgcataaccgatttcggaggccgaggacaatcgctgtttgtcatt
ctttgtctttttaagctgagctcagtgactggacaggctcgctattccgtgccagaggaa
caggcagaggggtcttttgttggaaacatcgctagagatttaggtttggatgttgcgagg
ctcctatcaggtaaagctcggattattacaaaggagagtcgacagtacgttgatttaaac
cgggacaaaggcacccttctgattaaagagcgaatcgaccgagaagaactgtgtggaaag
acgacgccctgtagcttcagtttcgaagtcattttagaaaatccaatccagctttatcgg
gtcaccgtggaggtaatagacgtaaacgataacaccccgtcgttcccaaaggaagaaatc
agtttgaatattgttgaaaatgccccatctggcactcggttctcaatagagtgtgcattt
gatcccgatgttggaattaatgacattcaaaaatatatcctcagacccgtggatcatttt
aaattggaagtacagagtcagcctgatggagggaaatccatcgaaatggttttacaaaac
ccgttagaccgagaaaaagaggagacacactcacttgtgctgattgcttcagatggagga
gaaccacaaagatcagggacagtacgtattcatatcactgtgctagatattaacgataat
gcgccagtttgtagtcagcctgtttataaagcagaagtcagggagaactctcaaaaagga
accgtagtaaccactgtgagtgccaatgacgcagataaaggacattatggtgaagtaaca
ttttccatagcacatgtgaccagagaggtaaagcagctttttgaagtgaatgtcaaaact
ggagatattaaagttgaaggtagactagattttgaaaaatctaacacgtatcaattaaat
gttaaggctagtgaccaaggaggatattcagatacgtgcaaagttataattcaattaatt
gacgaaaacgacaacgtccctacaatacagctgatgtcatttgttaatttgatttccgag
gactctcctccaggtacaactattgctgttattaatgtggatgatgttgattctgatggt
aacggtgttgtcaaatgctccattgactctgacatgcctttcaaaatcgagtcttcatta
acaggatattataccatagtaaccgataacgtcttagatagagaacgtatccctgagtac
aacatcaccataacggtgtctgaccaaggctcccctcctctgacaagcaggaaacacatc
aatgtaaaagtgtctgatgtgaatgacaaccctcctgaatttgaccagtcagagtacagt
aagactgtaccagagaacaattcacctgggttttctgtttttaatctcagtgctcgtgat
gcagactggggccaaaacgctcgggtttcttactttctggaggagaatgagattaatggg
gcagctgtgtcctcgttagtgtccgtgaattcagaaagtggtgtaatccacgcagtgagg
tcatttgattttgagcaaatcaaagtgtttgaattcaacataactgctcgtgatgctgga
tcccctccgcttagttcagctgctacagttagattaatagtccaagacctgaacgacaac
cctcctcaggttctgtacccggtccagactggaggctctctggtggctgagatggttcct
cgttcagcagatgtgggctatctggtcactaaagtggtggctgttgatgtggactctgga
cagaatgcctggctctcctacaaactgcagaaagccacagacagggcgctgtttgaagtg
ggcttacagaatggagaaataagaactatccgcggagtcactgataaagatgcagtgaaa
caaagactgactgtgatcgtggaggacaacgggcagccctctcgttcagctacagtcatt
gttaacgtggcggtggcggacagcttccctgaagtgctgtctgagttcactgactataca
caagacaaggagtacaatgacaacctgaccttctacttagtgttggctttggctgtagtt
tccttcctcttcatcacgtgtttagtggttattatatcagtgaagatctacagatggagg
cagtctcgcgtcctgtatcactccaatctccctgtgattccgtattatccaccacgttac
tcagacactttggggacagggactctccaacacgtgtacaactacgaggtgtgcaggacg
aatgactccagaaagagtgactgtaaattcggcacagtcggtagtcagaacgtgctgata
atggaccccagttctacaggaacgatgcagcgaatacaaagtgagaagaacatcctggat
gaaccagactctcctctagaggtgagttaa
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