Pseudomonas putida HB3267: B479_00110
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Entry
B479_00110 CDS
T02389
Name
(GenBank) hypothetical protein
KO
K19789
DNA repair protein RadD
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuh03400
]
B479_00110
DNA repair and recombination proteins [BR:
ppuh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
B479_00110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
T1R_D3-like
SNF2-rel_dom
DUF1572
TPK_catalytic
Motif
Other DBs
NCBI-ProteinID:
AGA70940
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Position
23044..24897
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AA seq
617 aa
AA seq
DB search
MNYFTETAANILGNKKLRSPQIEAYIKALEHFENSNEDALIVLPTGTGKSGLISIVPFGL
AKGRVLIITPGLVTKQSIRKTQDLLEDNFWINFDVIFSAEDLPVTCEFTSETHQSSLEQA
HFVYSNIQQVYNERGQSLTKRVAPDFFDLIIIDEGHHAPAGSWQKTLAHFSKAKKIFVTG
TPFRGDNQEVPGKLIHKTPLSEVMRDRYVKWLRKETVSAHELYFTIAEQPGIRLSKEQVL
EYKDREWVERSVALSPECSMDVIDLSIQKLGELRETSPNVPHKILAVGCSITHAEDLRTW
YQSKNLKVAVVHSYMDQADIAAAFRVIDNHQCDVVISVNMLMEGYDHRYLTVLALFRPYR
SENAFAQIVGRVLRAIPEEEITAFEIDNNAVVIYHKETGLDAMWTAFQTEVDRAKHQRTR
DYTITDEDYTRKEQELGGVSTSEAFVSDQDSYLADLDFNKIFSEKRAEVESIATQKVQAL
TGLEGYDADVLAQLKNVFLNAETKKAAQIIDPNLVEKRPEIARKQLREILTKKAQDEVAT
LLSDLQIPEKASTLYPIFKNHLPMVKPNTPNDGILVSFINTKLAKKFGRVADRDNGLLTR
SIEDVEVIINELRRMLK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaattatttcaccgaaacggcagctaacatcctcggcaataagaagctgcgcagcccg
cagatcgaggcctacatcaaagcgctggagcactttgaaaattccaacgaggatgcgctg
atcgtcctaccgaccggcacaggtaagagtggcctgatctccatcgtgccgtttggcctg
gcaaagggtcgcgtgttgatcatcacaccgggcttggtcacaaagcagagcatccggaag
acccaggatctgctggaagacaatttctggatcaatttcgatgtgatattcagtgctgag
gatctgccggtcacgtgtgaattcacgtcagaaacacatcagtccagcctggaacaggcc
cacttcgtctactcgaacatccagcaggtgtacaacgagcgcggacagtcactaaccaag
cgggtggctcctgatttcttcgacctaatcatcatcgatgaagggcaccatgcgccggcg
ggcagctggcaaaaaaccttggcccatttctccaaggccaagaagattttcgtgacaggc
accccatttcgcggcgacaaccaggaagtgccaggaaagctgatccacaagacaccgctg
tctgaggtgatgcgtgaccggtacgtgaagtggctgaggaaagagaccgtcagtgctcac
gagctttacttcacaatcgctgaacagccaggcatccggttatcaaaggaacaagtcctc
gaatataaggaccgggagtgggtagagcgtagcgtcgccttgtctccggaatgctcgatg
gacgttatcgacctgagcattcagaagctaggggagcttcgggaaacctctccaaatgtg
ccgcataagattctcgctgttggctgcagcatcacccatgcggaggacctgcgcacctgg
tatcagtccaaaaacctgaaggtggctgtcgtgcacagctacatggatcaggccgatatc
gctgcagcgtttcgggttatcgacaaccatcaatgcgatgtcgtcatctccgtgaacatg
ttgatggaaggctacgaccaccgctacctcacagttcttgcgcttttccggccctaccga
agtgaaaacgcctttgcgcagatcgtcggcagggtcctgcgagcgattccggaagaggag
atcacggcctttgagatcgataacaatgccgtggtgatatatcacaaggaaaccgggctg
gacgcgatgtggacggcctttcagactgaggttgatcgggcaaaacatcagcggacacgc
gactacaccatcacggatgaggactacacccgcaaagagcaggagctaggtggtgtttct
acctccgaagcattcgtgagtgaccaagattcctatcttgcagacctggacttcaataag
atcttctctgagaaaagagctgaggtcgaatccatcgcgacccaaaaggtccaggcgctt
acaggtctcgagggctacgacgcggatgtgttagcacagctcaagaacgtgttcctgaac
gccgagacgaagaaagcggctcaaatcatagatcccaaccttgtcgagaagcggcccgag
atcgcccgcaagcagcttcgtgagattctgacgaaaaaggctcaagacgaagtcgcgacc
ttgctcagcgacctgcagatcccagagaaagcttctaccctttatccgatattcaaaaac
cacctgccgatggtgaaacccaacacacctaacgacggtatactggtcagctttatcaac
accaagctggcgaagaaattcggtagggttgctgaccgtgacaatggcttgctgaccagg
tcaattgaggacgtggaagtgatcatcaacgaactgaggagaatgctgaaatga
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