Pseudomonas putida HB3267: B479_01150
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Entry
B479_01150 CDS
T02389
Name
(GenBank) ECF subfamily RNA polymerase sigma-24 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B479_01150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppuh03021
]
B479_01150
Transcription machinery [BR:
ppuh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B479_01150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
PhyR_sigma-like
HTH_23
Sigma70_r4
GerE
HTH_11
HTH_29
HD_assoc
HTH_Tnp_ISL3
HTH_24
HTH_40
HTH_7
MPAB_Lcp_cat
HTH_36
HTH_28
DUF6362
Motif
Other DBs
NCBI-ProteinID:
AGA71148
LinkDB
All DBs
Position
complement(260794..261297)
Genome browser
AA seq
167 aa
AA seq
DB search
MPSNDSVQTLYSDHHGWLHAWLRSKLGNAADAADLAQDTFVRLLQRREHLQLNTPRAFLR
TVARGLVIDHWRREELHRAYLEALAQLPEAQAPSAETRELLLELLERIARMLEGLKPKVR
RAFLLAQCEGLKHQAIADQMGISVRTVERYIADALYHCYLLRYADEC
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcaacgattccgtgcaaacgctctacagtgaccaccacggttggttgcatgcc
tggctacgcagcaagctgggcaacgccgccgatgccgcagacctggctcaggacaccttc
gtacgcctgttgcaacgtcgcgaacatctgcaactgaacacaccccgggctttcctgaga
acggttgcgcgtgggctcgtgatcgaccactggcggcgcgaggaactgcacagggcctat
ctcgaagcactggcacagttgccggaagcgcaggccccttcggccgaaacccgtgagctg
ctgctggaattgctggagcgcatcgcgcgcatgctcgaaggcctcaagcccaaagtacgt
cgtgcattcctgcttgcccaatgcgaggggctgaagcaccaggcgatcgccgaccagatg
gggatctcggtgcgtaccgtggagcgctatatcgccgacgcgctctaccattgctacttg
ctgcgctacgccgacgagtgttga
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integrated database retrieval system
