KEGG   Pseudomonas putida HB3267: B479_02060
Entry
B479_02060        CDS       T02389                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
ppuh  Pseudomonas putida HB3267
Pathway
ppuh00260  Glycine, serine and threonine metabolism
ppuh00460  Cyanoamino acid metabolism
ppuh00630  Glyoxylate and dicarboxylate metabolism
ppuh00670  One carbon pool by folate
ppuh00680  Methane metabolism
ppuh01100  Metabolic pathways
ppuh01110  Biosynthesis of secondary metabolites
ppuh01120  Microbial metabolism in diverse environments
ppuh01200  Carbon metabolism
ppuh01230  Biosynthesis of amino acids
ppuh01240  Biosynthesis of cofactors
ppuh04981  Folate transport and metabolism
Module
ppuh_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:ppuh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    B479_02060
  09102 Energy metabolism
   00680 Methane metabolism
    B479_02060
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    B479_02060
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    B479_02060
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    B479_02060
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    B479_02060
Enzymes [BR:ppuh01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     B479_02060
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Cys_Met_Meta_PP DegT_DnrJ_EryC1 Beta_elim_lyase OKR_DC_1
Other DBs
NCBI-ProteinID: AGA71328
LinkDB
Position
480807..482060
AA seq 417 aa
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANAAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTNTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPEFKAYQQQVIENAQAMAQ
VFIDRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCVALAGWICDILDNLGDADVEADVAKNVAALCADFPVYR
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttcagcaagcaagaccagattcagggttacgacgatgcactgctggcggcgatgaat
gccgaagaacagcgccaggaagaccatatcgagctgatcgcctcggaaaactacacctcc
aagcgcgtgatgcaggcccaaggcagcggcctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggcggctgcgagcacgtggacaaggtagaggccctggccatcgag
cgcgccaagcagctgttcggtgccgactacgccaacgtccagccgcactccggctcctcg
gccaacgctgcggtctacctggccctgctgcaggctggtgacaccatcctcggcatgagc
ctggcccacggcggccacctgacccacggtgccaaggtgtcgtcttcgggcaaactgtac
aacgctgtgcaatacggcatcgacaccaacaccggcctgatcgactacgacgaagtcgag
cgcctggctgtcgagcacaagccaaaaatgatcgttgccggcttctcggcctactccaag
accctcgacttcccacgcttccgcgccatcgccgacaaggtcggtgcgctgctgttcgtc
gacatggcccacgtagccggcctggttgccgctggcctgtacccgaacccgatcccgttc
gccgatgtggttaccaccactactcacaagaccctgcgcggcccacgtggcggcctgatc
cttgccaagtcgaacgaagagatcgagaagaagctgaacgccgcggtgttccctggcgcc
cagggcggcccgctgatgcacgtgatcgccgccaaggccgtttgcttcaaggaagcgctg
gagcctgaattcaaggcctaccagcaacaagtgatcgaaaacgcccaggccatggcccag
gtgttcatcgaccgcggctacgacgtggtttccggcggcaccgacaaccacctgttcctg
gtcagcctgatccgccagggcctcaccggcaaagatgccgacgccgccctgggccgcgcg
cacatcaccgtcaacaagaacgccgtgccgaatgacccgcagtcgccattcgtcacctcg
ggcctgcgcatcggtaccccggccgttaccacccgcggcttcaaggtcgctcagtgcgtg
gccctggccggctggatctgcgacatcctcgacaacctcggtgacgcagacgtcgaagcc
gatgtggcgaagaacgtcgcggccctttgcgcagatttccctgtttaccgctga

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