Pseudomonas putida HB3267: B479_02060
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Entry
B479_02060 CDS
T02389
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh00260
Glycine, serine and threonine metabolism
ppuh00460
Cyanoamino acid metabolism
ppuh00630
Glyoxylate and dicarboxylate metabolism
ppuh00670
One carbon pool by folate
ppuh00680
Methane metabolism
ppuh01100
Metabolic pathways
ppuh01110
Biosynthesis of secondary metabolites
ppuh01120
Microbial metabolism in diverse environments
ppuh01200
Carbon metabolism
ppuh01230
Biosynthesis of amino acids
ppuh01240
Biosynthesis of cofactors
ppuh04981
Folate transport and metabolism
Module
ppuh_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
B479_02060
09102 Energy metabolism
00680 Methane metabolism
B479_02060
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
B479_02060
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
B479_02060
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
B479_02060
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
B479_02060
Enzymes [BR:
ppuh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
B479_02060
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AGA71328
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Position
480807..482060
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANAAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTNTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPEFKAYQQQVIENAQAMAQ
VFIDRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCVALAGWICDILDNLGDADVEADVAKNVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagattcagggttacgacgatgcactgctggcggcgatgaat
gccgaagaacagcgccaggaagaccatatcgagctgatcgcctcggaaaactacacctcc
aagcgcgtgatgcaggcccaaggcagcggcctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggcggctgcgagcacgtggacaaggtagaggccctggccatcgag
cgcgccaagcagctgttcggtgccgactacgccaacgtccagccgcactccggctcctcg
gccaacgctgcggtctacctggccctgctgcaggctggtgacaccatcctcggcatgagc
ctggcccacggcggccacctgacccacggtgccaaggtgtcgtcttcgggcaaactgtac
aacgctgtgcaatacggcatcgacaccaacaccggcctgatcgactacgacgaagtcgag
cgcctggctgtcgagcacaagccaaaaatgatcgttgccggcttctcggcctactccaag
accctcgacttcccacgcttccgcgccatcgccgacaaggtcggtgcgctgctgttcgtc
gacatggcccacgtagccggcctggttgccgctggcctgtacccgaacccgatcccgttc
gccgatgtggttaccaccactactcacaagaccctgcgcggcccacgtggcggcctgatc
cttgccaagtcgaacgaagagatcgagaagaagctgaacgccgcggtgttccctggcgcc
cagggcggcccgctgatgcacgtgatcgccgccaaggccgtttgcttcaaggaagcgctg
gagcctgaattcaaggcctaccagcaacaagtgatcgaaaacgcccaggccatggcccag
gtgttcatcgaccgcggctacgacgtggtttccggcggcaccgacaaccacctgttcctg
gtcagcctgatccgccagggcctcaccggcaaagatgccgacgccgccctgggccgcgcg
cacatcaccgtcaacaagaacgccgtgccgaatgacccgcagtcgccattcgtcacctcg
ggcctgcgcatcggtaccccggccgttaccacccgcggcttcaaggtcgctcagtgcgtg
gccctggccggctggatctgcgacatcctcgacaacctcggtgacgcagacgtcgaagcc
gatgtggcgaagaacgtcgcggccctttgcgcagatttccctgtttaccgctga
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