Pseudomonas putida HB3267: B479_03675
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Entry
B479_03675 CDS
T02389
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh00270
Cysteine and methionine metabolism
ppuh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
B479_03675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppuh03000
]
B479_03675
03032 DNA replication proteins [BR:
ppuh03032
]
B479_03675
03036 Chromosome and associated proteins [BR:
ppuh03036
]
B479_03675
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ppuh02048
]
B479_03675
Enzymes [BR:
ppuh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
B479_03675
Transcription factors [BR:
ppuh03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
B479_03675
DNA replication proteins [BR:
ppuh03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
B479_03675
Chromosome and associated proteins [BR:
ppuh03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
B479_03675
Prokaryotic defense system [BR:
ppuh02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
B479_03675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AGA71651
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All DBs
Position
841215..842438
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AA seq
407 aa
AA seq
DB search
MSLTDSDENTYLFSWAEFFAGGGMARAGLGNDWRCVFSNDNDVVKISSYMENWSSEHFLP
GDIRLVTADQIPDNLTLAWASSPCQNFSSAGLGDGLSGASSSVFTKWWELIASKTATGRE
PKIVVLENVVGLLQSRGGLDFKLISQSFVECGYRFGVTMIDAINFLPQSRPRIFFVAVKI
DVELPSSLRSDSPISLWHPTQVVKAVEYLPEELRCRHIWWRLPEAVFRTSSLADLMLHDD
SSLSWHTDAQTLKLLGSMTPTNLEKIRKAKESGSLVIGTLYRRMRLIDGINKSRAEVRFD
GVAGCLRASDGGSSRQMLIYVEGESVRTRHMSPRESARLMGLAETYKLPNLKTHAVKLVG
DGVAVPVVKFLEQHLLSPLARAVSIKKDNSAFVSSPKKQLTEVGCLA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
ttgagccttactgattccgatgaaaatacttatctgtttagttgggcggagttttttgcc
ggaggagggatggcacgcgctggtctggggaatgactggcgatgtgtcttttcaaatgat
aacgatgttgtgaagatttcctcttatatggaaaattggtcgtctgaacatttcttgcca
ggggatatcagattagtaaccgctgaccagattcctgataatttaacgcttgcgtgggca
agctcgccttgtcagaatttcagctctgctggtttaggggatggattgtcgggagccagt
tcttcggttttcacgaaatggtgggagctaattgcaagcaaaactgccacgggccgcgaa
ccgaagattgtagttttagaaaacgttgtcgggctcttacagtctcgtggaggcttggac
tttaagctgattagccaaagctttgtcgaatgtggctatcggttcggcgtcacaatgatc
gatgcaataaatttcttgccacaaagccggccaagaattttttttgttgccgtaaaaatt
gatgttgagcttcccagttcgctgcgctcagatagtccaatttctctctggcacccaact
caggttgttaaggccgtcgaatatttgccggaggaattgagatgccggcacatttggtgg
cggttgccagaagctgttttcaggacatcatctcttgcagatttgatgcttcatgacgat
tcgagtttaagttggcacactgatgctcaaactttgaagctcttagggtcaatgacacca
actaatctagaaaagatcagaaaggccaaagaatctggtagtcttgtaattggtacttta
tatcgtcgcatgcgattaatcgatggtattaataaatcacgagctgaggttaggtttgac
ggcgtggccggttgcttgagagcttcggatggtgggtcttcacgtcagatgcttatatat
gtagaaggtgagagtgttcgtacgcggcatatgtctccacgtgaatctgcgagacttatg
gggctagctgagacttacaaattacctaatttaaagacacatgcagtaaagttggttgga
gatggtgttgcagtgccagttgtaaaatttctagagcaacatttgcttagtcctctagca
cgcgcagtctctatcaaaaaagataattctgcttttgtatcttctcctaaaaaacaactc
actgaggtcggatgtctagcttag
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