Pseudomonas putida HB3267: B479_04190
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Entry
B479_04190 CDS
T02389
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuh03400
]
B479_04190
Enzymes [BR:
ppuh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
B479_04190
DNA repair and recombination proteins [BR:
ppuh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
B479_04190
Prokaryotic type
B479_04190
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AGA71754
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All DBs
Position
complement(954557..955999)
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AA seq
480 aa
AA seq
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MHLTWLRSDLRIDDNTALAAASERGPTLALWLVSPGQWLAHDDAACKVDFWLRNLRDLRQ
SLERLNIPLLIRRIDTWDQAPQAVLDVCRQHQVQSVHWNEEYGINEQCRDDATRALLEKS
AIQAHSHLDQLLFRPGTILTRGGDYFQVFSQFKKSCLEHLHRSLPALARQIKRQAPLQVS
SDPIPQHVDGFEKPAQALRDHWPAGEAEAQARLTRFLDETIDDYQQLRDLPAKPGTSQLS
AYLAAGVISPRQCLHGALASNRGEFDSGSSGVQTWINELLWREFYKHILTGYPQVSRHRA
FRAQTEALPWRDAPADLEAWEQGRTGFPIIDAAMRQLLHTGWMHNRLRMIVAMFLSKNLL
IDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQRFDPQGRFIR
HWLPELQGVDEKAIHFPVKSADLFARYSYHSPIVDLDSSRQRALEAFKNLPRRQDQRAAS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgacctggctgcgcagcgacctgcgcatcgatgacaacaccgcgctagccgcc
gccagcgaacgcggcccgaccctcgcactgtggctggtcagccccgggcaatggctggcc
cacgacgacgccgcctgcaaagtcgacttctggctgcgcaacctgcgcgacctgcgccag
tcgctggagcgcttgaacatccccctgctgatccgcaggatcgacacctgggaccaggcg
ccacaggccgtactcgatgtctgccgccaacatcaggtgcaaagcgtgcactggaacgag
gagtacggcatcaacgagcaatgtcgcgacgacgccacccgcgcgctgctggaaaagtcg
gccatccaggcccacagccacctcgaccagctgttgttccgcccgggcaccatccttacc
cgcggcggcgactacttccaggtgttcagccagttcaagaagagctgcctggagcacctg
caccgcagcctccctgccctggcccgccagataaaacgccaggcaccgctgcaggtcagc
agcgacccgatcccacagcacgtggacggcttcgaaaaacccgcgcaggcgctgcgcgac
cactggccggccggcgaagccgaagcgcaggcgcggctgacccgttttctcgatgaaacc
atcgacgattaccaacagctgcgtgacttgcctgcaaagcccggtaccagccagctctcc
gcctatctggccgccggcgtgatctcgccacgccagtgcctgcacggtgccctggccagc
aaccgcggcgagttcgacagcggcagcagcggcgtgcaaacctggatcaacgagctgctc
tggcgcgaattctacaaacacatcctgaccggttatccacaggtctcgcgtcaccgcgcc
ttccgcgcccagaccgaagccctgccctggcgcgatgcaccggccgacctcgaagcatgg
gaacagggccgaaccggcttcccgatcatcgacgccgccatgcgccaactgctgcacacc
gggtggatgcacaaccgcctgcgcatgatcgtggccatgttcctcagcaagaacctgctg
atcgactggcgcaagggcgagcggcatttcatgcgccacttgatagacggcgacctggcc
gccaacaacggcggttggcagtggagcgcgtccactggcaccgacgcagtgccctatttc
cgcatcttcaacccggtttcacagtcgcagcgattcgacccgcaagggcgtttcattcgg
cactggctgccggaattgcagggggttgatgaaaaagccattcatttccccgtgaagtcg
gccgatctttttgctagatattcctaccacagtccaattgtcgatctcgacagcagtcgt
cagcgcgcactggaggcattcaagaacctcccgcgccggcaggatcagagggcagcatct
tga
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