Pseudomonas putida HB3267: B479_05790
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Entry
B479_05790 CDS
T02389
Symbol
lysS
Name
(GenBank) lysyl-tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
B479_05790 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppuh01007
]
B479_05790 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppuh03016
]
B479_05790 (lysS)
Enzymes [BR:
ppuh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
B479_05790 (lysS)
Amino acid related enzymes [BR:
ppuh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
B479_05790 (lysS)
Transfer RNA biogenesis [BR:
ppuh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
B479_05790 (lysS)
Prokaryotic type
Other AARSs
B479_05790 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AGA72074
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All DBs
Position
1303971..1305473
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AA seq
500 aa
AA seq
DB search
MSDLKTEAQDLQQEENALIALRKEKLAAERAKGNAFPNDFRRDSYCNDLQKQYADKTKEE
LEAAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLPEETLAAVKTWDLGDIISAE
GTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFR
VRSQVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLK
RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLV
LGTTDVPYGDKVFHFGEPFARLSVFDSILKYNPELTAADLQDVDRARDIAKKAGAKVLGH
EGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARRNDDNPAVTDRFELFIGGREIAN
AYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML
LTNSPSIRDVILFPHMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctcaagaccgaagcgcaagacctgcaacaggaagaaaacgccctgatcgcc
ctgcgcaaggaaaagcttgccgccgagcgcgccaagggcaatgccttccccaatgacttc
cgtcgcgacagctactgcaacgacctgcagaagcagtatgcggacaagaccaaggaagaa
ctggaagctgcagcgattccggtcaaggttgccggccgcatcatgctcaaccgcggctcg
ttcatggtcattcaggacatgaccggccgtatccaggtctacgtcaaccgcaagaccctg
ccggaagagaccctggctgcggtcaagacctgggacctgggcgacatcatcagcgccgaa
ggtaccctggcccgttccggcaagggcgacctgtacgtcgaaatgaccaacgtgcgcctg
ctgaccaagtcgctgcgcccgctgcccgacaagcaccacggcctgaccgacaccgagcag
cgctaccgccagcgttacgtcgacctgatggtcaatgaagaaacccgtcacaccttccgt
gtgcgttcgcaggtgatctcgcacatccgcaagttcctcatcgagcgcgacttcctcgaa
gtcgagacgccgatgctgcaaaccatcccgggcggtgccgcggccaagccgttcgaaacc
caccacaacgccctggacatggccatgttcctgcgtatcgcgccggagctgtacctcaag
cgcctggtggttggtggcttcgagaaggtattcgagatcaaccgcaacttccgtaacgaa
ggcgtttcgactcgtcacaaccctgaattcaccatgctcgagttctaccaggcctacgcc
gactaccgcgacaacatggacctcaccgaggaactgttccgcgagctggcgcagctggta
ctgggcactaccgacgtgccgtacggcgacaaggtgttccacttcggcgagccgttcgcc
cgcctgtcggtattcgactcgatcctcaagtacaacccggagctgaccgctgccgacctg
caggacgtcgaccgcgcccgcgacatcgccaaaaaggccggcgccaaggtgctgggccac
gaaggcctgggcaagctgcaggtgatgattttcgaagagctggtcgagcacaagctggag
cagccgcacttcattaccgagtacccgttcgaagtgtcgccgctggcccgtcgcaacgac
gacaacccggctgttaccgaccgtttcgagctgttcatcggtggccgcgagatcgccaac
gcctactccgagctcaacgatgccgaagaccaggccgagcgcttcctggcccaggtggcc
gagaaggacgccggtgacgacgaagccatgcactacgacgccgacttcgttcgcgcactg
gagtacggcatgccgccgactgcaggtgaaggtatcggtatcgaccgcctggtgatgctg
ttgaccaactcgccgtcgatccgcgacgtgatcctgttcccgcacatgcgtccgcaggcc
tga
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