Pseudomonas putida HB3267: B479_06165
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Entry
B479_06165 CDS
T02389
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppuh03021
]
B479_06165
Transcription machinery [BR:
ppuh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B479_06165
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
KinB_sensor
Motif
Other DBs
NCBI-ProteinID:
AGA72149
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All DBs
Position
1384758..1385765
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AA seq
335 aa
AA seq
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MALSKEVPEFDIDDDLLLMETGIVLETDVVSDEPAVSSVRTRAKSGSSLKQHKYIDYSRA
LDATQLYLNEIGFSPLLSPEEEVHFARLSQKGDPAGRKRMIESNLRLVVKIARRYVNRGL
SLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKE
LNVYLRAARELTQKLDHEPSPEEIATLLEKPVAEVKRMLGLNERVSSVDVSLGPDSDKTL
LDTLTDDRPTDPCELLQDDDLSQSIDQWLGELTDKQREVVVRRFGLRGHESSTLEDVGLE
IGLTRERVRQIQVEGLKRLREILEKNGLSSESLFQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggctctcagtaaagaagtgccggagtttgacatcgacgatgacctgcttctgatggag
acgggaatcgttttggaaacggatgtggtgtcagacgaacctgctgtatcttcggttcgg
acgagggccaagtcgggctcttcgctcaagcaacacaagtacatcgattacagccgggcg
ctcgatgccacccagttgtatctcaacgagataggattctcgcctctgctttcgccggaa
gaggaagtgcactttgcgcgtctgtcgcaaaagggcgaccctgccggccgcaagcgcatg
atcgaaagcaacctgcgcctggttgtaaaaattgcccgtcgttacgtgaaccgcggcctg
tcgctgctcgacctgatcgaggagggcaaccttgggctgatccgtgcggtcgagaagttc
gacccggagcgtggtttccggttctcgacctatgcgacctggtggattcgccagaccatc
gagcgggcgatcatgaatcagacccgcaccattcgcctgccgatccacgtggtcaaggaa
ctgaacgtctacctgcgcgctgcgcgcgagctgacccagaaactggaccacgaaccctcg
ccagaagaaatcgccacgctgctggagaaaccggtcgccgaggtcaagcgcatgctcggc
ctgaacgagcgggtgtcttcggtggatgtgtcgctcggcccggactcggacaagaccctg
ctcgataccctgaccgacgaccgcccgaccgacccatgcgaactgctgcaggatgatgac
ctgtcgcagagcatcgaccagtggctgggcgagttgaccgacaagcagcgtgaagtggtg
gtgcgccgctttggcttgcgcgggcatgaaagcagcaccctggaagatgtcggactggag
attggcctgacccgcgaacgggtgcggcagatccaggtcgaggggctcaagcgtttgcgt
gagattctcgagaagaacggcctgtccagtgagtcgttgttccagtag
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