Pseudomonas putida HB3267: B479_06315
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Entry
B479_06315 CDS
T02389
Symbol
rumA
Name
(GenBank) 23S rRNA m(5)U1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppuh03009
]
B479_06315 (rumA)
Enzymes [BR:
ppuh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
B479_06315 (rumA)
Ribosome biogenesis [BR:
ppuh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B479_06315 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_25
Methyltransf_31
Cons_hypoth95
MTS
Methyltransf_11
Methyltransf_23
Methyltr_RsmB-F
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_15
PCMT
Methyltransf_4
Ubie_methyltran
TPMT
PrmA
DREV
Motif
Other DBs
NCBI-ProteinID:
AGA72179
LinkDB
All DBs
Position
1412174..1413532
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AA seq
452 aa
AA seq
DB search
MSKKKSNSGLRFQPAGGNRSPQVPVGKKQRLEIERLAGDGRGIAFHEGRTWFVSGALAGE
AVEARVLNARGKVVEARLERLLQASTERRQAPCRYYERCGGCNLQHLPHEAQLALKQRTL
AEQLQRVAGVQPEEWAAPLSGPEFGYRRRARVAVRWDIKARQLEVGFRAEASQDVIAIDD
CAVLVQPLQSILRHLPTVLRSLSKPQALGHVELFSGTAEALLVRHVAPLPAEDLARLQAF
CEQANAQLWLQGEGEPAPVDPAAQLGFALAPWQLELAWRPGDFVQVNAQVNTAMIEQALA
WLAPQADERVLDLFCGLGNFALPLARQAREVVAVEGVQAMVDRAAANARNNNVHNARFFQ
ADLSQPLAGAGWAAEGFSAVLLDPPRDGAFEVVQGIARLKARRLVYVSCNPATLARDAQV
LVGQGYRLKRAGILDMFPQTAHVEAMALFEAG
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaagaaaagcaacagcggcctgcgcttccagccggccggcggcaaccgcagc
ccccaggtcccggtgggcaagaagcagcgcctggaaatcgagcgcctggccggtgacggc
cggggcattgccttccacgaagggcgcacctggttcgtcagcggcgccctggccggtgag
gccgttgaggcgcgggtgctcaatgcccgtggcaaagtggtcgaggcccgcctggagcgc
ctgctgcaggccagcaccgaacgccgtcaggcaccgtgccggtattacgagcgttgcgga
ggctgcaacctgcagcacctgccgcacgaagcgcagttggcgctcaagcagcgcaccctg
gcagagcagctgcagcgggtggccggcgtgcagcccgaggaatgggccgcaccgctgagc
gggccggagttcggctaccggcgtcgcgcccgcgtggccgtgcgctgggacataaaggcg
cggcaactggaggtcggcttccgcgccgaagccagccaggacgtcattgccatcgacgat
tgcgcggtgctggtacagcccttgcagtcgattctgcgccatttaccgaccgtgctgcgc
tcgctgagcaagccgcaggcgctgggccatgtagaactgttcagcggtactgccgaggcg
ctgctggtgcgccatgtcgcgccgttgcccgctgaagacctggccaggctgcaggcgttc
tgcgaacaggccaatgcccagttgtggctgcagggcgaaggggagccggcgccagtggac
ccggccgcgcagttgggctttgccttggcgccctggcagctggaactggcctggcgccca
ggtgacttcgtgcaggtgaatgcccaggtcaacacggcgatgatagagcaggccctggcc
tggctcgcaccgcaggccgacgagcgtgtgctggacctgttctgcggcctgggcaacttc
gccctgccactggcccggcaggcgcgcgaggtagtggcagtggaaggagtgcaggccatg
gtcgatcgggccgcggccaatgcccggaacaacaatgtgcataacgcacggttttttcag
gccgatttatcgcagcctttggcgggtgccggatgggccgccgagggcttttctgcggta
ctcttggatccaccgcgcgacggtgctttcgaggtggtgcaaggcatcgcccgcctcaag
gccagaaggctggtctatgtatcgtgcaacccggccacgctggcgcgagacgcgcaggtg
ctggtcggccaggggtaccggttaaaaagggccgggattctcgacatgtttcctcagacg
gcgcatgtcgaggccatggcgttattcgaagcgggctag
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