Pseudomonas putida HB3267: B479_07645
Help
Entry
B479_07645 CDS
T02389
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppuh03016
]
B479_07645 (truA)
Enzymes [BR:
ppuh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
B479_07645 (truA)
Transfer RNA biogenesis [BR:
ppuh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B479_07645 (truA)
Prokaryotic type
B479_07645 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AGA72445
LinkDB
All DBs
Position
1701968..1702822
Genome browser
AA seq
284 aa
AA seq
DB search
MDIIDTAAAESAAEGYSRIALGVEYKGARYRGWQRQASGVPSVQQALEQALSKVANEPIS
VICAGRTDAGVHGCGQIVHFDTRAVRDERAWTMGTNFNLPHDISVVWSRPMPADFHARFK
ACARRYRYVIYNDPIRPAHLAEEVTWNHRPLDVERMAEAAQYLLGTHDFSAFRASQCQAK
SPIKHIYHLRVTRHGQMIVLDVRATAFLHHMVRNIAGVLMTIGAGERPVTWAREVLEGRN
RREGGVTAHPYGLYLVQVEYPEEYALPKRYIGPHFLTGYEALAD
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttggacatcatcgacaccgccgccgccgagtccgcggccgaaggctactcccgcatcgcc
ctgggcgtggaatacaaaggcgcgcgctaccgtggctggcagcgccaggccagtggcgtg
cccagtgtccagcaggccctggagcaggcgctgtccaaggtggccaacgagcccatctcg
gtaatctgcgccgggcgcaccgacgccggtgtgcatggctgcgggcagatcgtgcacttc
gacacccgcgccgtgcgcgatgagcgcgcctggaccatgggcaccaacttcaacctgccc
catgacatcagcgtggtctggtcgcggccgatgccggccgacttccatgcccgcttcaag
gcctgcgcccggcgttaccgctacgtcatctacaacgacccgatccgcccggcccatctg
gccgaggaagtcacctggaaccaccgcccgctggatgtcgaacgcatggccgaagccgcg
cagtacctgcttggtacccatgacttcagtgccttccgcgccagccagtgccaggccaag
tcgccgatcaagcacatctaccatctgcgcgtcacccgccatggccagatgatcgtgctg
gacgtgcgcgccacggctttcctgcaccacatggtgcgtaacattgccggtgtactgatg
accatcggtgccggagagcgcccggtcacctgggcgcgtgaggtgctggaagggcgcaac
cgccgcgaaggtggggtcacggcgcacccatacggcctctacctggtgcaggtggagtac
cccgaggagtacgcgctgcccaagcgttacatcggtccacactttttgaccggttacgaa
gcattggcagactga
DBGET
integrated database retrieval system
