Pseudomonas putida HB3267: B479_08870
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Entry
B479_08870 CDS
T02389
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh00630
Glyoxylate and dicarboxylate metabolism
ppuh00680
Methane metabolism
ppuh01100
Metabolic pathways
ppuh01120
Microbial metabolism in diverse environments
ppuh01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
B479_08870
09102 Energy metabolism
00680 Methane metabolism
B479_08870
Enzymes [BR:
ppuh01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
B479_08870
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4_Nqo3
Fer4
Fer4_21
Fer4_10
Fer4_9
Fer4_18
Fer4_2
Fer4_16
Fer4_17
Fer4_6
Fer4_4
Fer4_8
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
AGA72680
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Position
1970138..1973020
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AA seq
960 aa
AA seq
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MINFFDPASDKSSDLGTPARDSEVQVSLSIDGRAITVPAGTSVMRAAAMLGTSIPKLCAT
DSLEAFGSCRMCMVEIEGMRGYPASCTTPVSEGMVVHTETPRLAGLRRNVMELYISDHPL
DCLTCSANGNCELQTVAGQVGLREVRYGYDGANHLAEKKDVSNPYFDYEPSKCIVCSRCV
RACEDIQGTFALTITGRGFESRVAAAGGENFLASECVSCGACVQACPTATLTEKSLVQLG
QPERAVITTCAYCGVGCSFRAEVKGDQLVRMVPDKNGGANHGHACVKGRFAWGYATHPDR
ITKPMIRKRLEDPWQEVSWDEAVTYAASEFRRIQLKYGRDSIGGITSSRCTNEEAYLVQK
LVRTAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQSFDSVMQADVVLVIGANPTDAHP
VFGSQLKRRLRQGARLIVIDPRRIDLVDSPHARAELHLQLRPGTNVAMLNALAHVIVTEG
LLAQRFIDARCETEDFARWRDFVSLAENAPEVLGPVCGVPAEQIRAAARLYATGGNAAIY
YGLGVTEHSQGSTAVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELPGY
RHISNEVVRAEFEQAWGVTLQPDPGLRIPNMFEAALDGSFKALYCQGEDIAQSDPNTQHV
TAALLAMECVVVQDIFLNETAKFAHVFLPGSSFLEKDGTFTNAERRISRVRKVMEPLAGK
ADWEATIALANALGYPMSYRHPSEIMDEIARLTPTFHRVSYAEIDRHGSLQWPCNDAAPD
GTPTMHIDQFVRGKGRFMLTGYVPTEEKVNNRYPLLLTTGRILSQYNVGAQTRRTGNVAW
HDADRLEIHPTDAESRGIQDGDWVGIGSRAGQTVLRAKVSTRVAPGVVYTTFHFPESGAN
VITTDNSDWATNCPEYKVTAVEVVKVFQPSQWQKRYQDFSDEQRRLLKERRIAEKTEVRR
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaatttcttcgaccccgcttctgataaaagcagcgacctcggcaccccggcccgt
gacagcgaggtacaggtcagcctgagcatcgatggccgcgccatcactgtgcccgccggt
acttcggtgatgcgtgccgcggccatgctcggcaccagcatccccaaactgtgtgccacc
gacagcctcgaagcctttggctcgtgccgcatgtgcatggtggaaatcgaaggcatgcgc
ggttacccggcctcctgcaccaccccggtcagcgaaggcatggtggtgcacaccgaaacc
ccgcgcctggccggcctgcgccgcaatgtgatggagctgtacatctccgaccacccgctg
gactgcctgacctgttcggccaacggcaactgcgagctgcagaccgtggccggccaggtg
ggcctgcgcgaggtgcgctatggctacgacggcgccaaccacctggccgagaaaaaggat
gtatccaacccgtatttcgactacgagccgagcaagtgcatcgtctgcagccgctgcgtg
cgtgcctgcgaggacatccagggcaccttcgccctgaccatcaccgggcgcggtttcgaa
tcgcgggtggcggcggcgggtggtgaaaacttcctcgcctccgagtgcgtgtcttgcggc
gcctgcgtgcaggcctgcccgaccgcgaccctgaccgaaaagagcctggtacagctgggc
cagcccgagcgtgcggtcatcaccacctgcgcctattgcggcgtcggctgctcgttccgc
gccgaagtgaagggcgaccagctggtgcgcatggtcccggacaagaacggcggcgccaac
cacggccacgcctgcgtcaagggccgcttcgcctggggttacgccacccacccggaccgc
atcaccaagccaatgatccgcaagcgcctggaagacccatggcaggaagtcagctgggac
gaagcggtgacctacgccgccagcgagttccgccgtatccagctgaagtacggtcgcgat
tccatcggcggcatcacctccagccgctgcaccaacgaagaagcctacctggtgcagaaa
ctggtgcgcacggcgttcggcaacaacaacgtcgacacttgcgcgcgggtatgccattcg
cccaccggctatggcctgaagcagaccctgggtgagtcggctggtacacaaagcttcgac
tcggtgatgcaggccgacgtggtgctggtgatcggcgccaaccccaccgacgcccacccg
gtattcggctcgcagctcaagcgccgcctgcgccagggcgcgcggctgatcgtgatcgac
cctcggcgcatcgacctggtcgactcgccgcacgcccgcgccgagctgcacctgcaactg
cgccccggtaccaacgtggccatgctcaacgccctggcccacgtgatcgtcaccgaaggc
ctgctggcccagcgcttcatcgatgcccgctgtgaaaccgaggatttcgcccgctggcgc
gacttcgtcagcctggcggaaaacgcccccgaagtgcttggcccggtctgcggcgtgcct
gccgagcagatccgcgccgcagcgcgcctgtatgccaccggcggcaacgcggctatctac
tacggcctgggcgtgaccgaacacagccagggcagcaccgcggtgatgggcatcgccaac
ctggccatggccaccggcaacatcggccgtgaaggggtaggggtgaacccgctgcgcggg
cagaacaacgtgcaaggctcgtgcgacatgggctcgttcccccacgaactgcccggctac
cggcacatttccaacgaagttgtacgcgccgagttcgagcaggcctggggcgtgaccctg
cagcctgacccgggcctgcgcatccccaacatgttcgaggctgcgctggacggcagtttc
aaggccctttactgccagggcgaggacattgcccagagcgaccccaacacccagcacgtc
actgcggccctgctggccatggagtgcgtggtggtgcaggacatcttcctcaacgaaaca
gccaagttcgcccatgtgttcctgccgggcagctcgttcctggagaaggacggtaccttc
accaatgccgagcggcgtatttcgcgggtgcgcaaggtcatggagccgttggccgggaag
gccgactgggaggcgaccatagccctggccaatgccctgggctacccgatgagctaccgt
cacccgtccgagatcatggacgagatcgcccgccttacgcctaccttccaccgcgtcagc
tacgccgagatcgaccgccacggcagcctgcagtggccgtgcaacgacgcagcgccggat
ggcacgccgaccatgcacatcgaccagttcgtacgtggcaaggggcgcttcatgctcacc
ggctacgtgcccaccgaggagaaggtcaacaaccgctacccgctgctgctgaccaccggg
cgcattctcagccagtacaacgtcggcgcccagacccggcgtaccggcaacgtcgcctgg
catgacgccgaccgcctggaaatccacccgaccgacgccgaaagccgcggcatccaggat
ggcgactgggtcggcatcggcagccgcgccgggcagacggtgctgcgcgccaaggtcagt
acgcgggtggcgccgggtgtggtgtacaccaccttccacttccccgagtcgggggccaac
gtgattaccaccgacaactccgactgggccaccaactgccctgagtacaaggtgacggcg
gtggaggtggtgaaagtgttccagccttcgcagtggcagaagcgctaccaggacttcagt
gacgagcagcggcgcttgctgaaggagcgtcgtattgcggagaaaaccgaggtgcgccga
tga
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