Pseudomonas putida HB3267: B479_11410
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Entry
B479_11410 CDS
T02389
Name
(GenBank) deoxyribodipyrimidine photolyase-like protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuh03400
]
B479_11410
Enzymes [BR:
ppuh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
B479_11410
DNA repair and recombination proteins [BR:
ppuh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
B479_11410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AGA73180
LinkDB
All DBs
Position
2513759..2515285
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AA seq
508 aa
AA seq
DB search
MRLGLVLGDQLSFDLASLNALDPARDAVLMAEVEGEARYVPHHPLKIVLIFSAMRHFALA
LRERGWQVHYVQLDDDGNSGTIVGELRRWQQALGATHIHLTECGEWRLEQALRDAALPLV
WHRDTRFLCSREAFARWARERGQLRMEHFYRGMRKRTGLLLEPDGSPAGGTWNLDGDNRK
ALPRQLRGPFAAHFAQDDITVAVIALVRQRFSDHYGAIDGFDYPVTHAEAQQLWQHFLDF
GLAAFGDYQDAMAEGEPYLFHARISAALNIGLLDVRFLCDGVDKAWREGRVPLNAAEGFI
RQLIGWREYVRGIYWLRMPEYAALNYLGNERALPEFYWTGRTRMRCMEQAIGQTLRLGYA
HHIQRLMVTGNFALLAGIAPTAICEWYLAVYMDAFDWVELPNTLGMVMYADGGYLGSKPY
CASGRYIQRMSDHCKACSYRVDQVAEEDACPFNALYWHFLIRHRHLLSANPRLALVYRNL
DGMSADRRDAIWQRGQSLLARLDAVQPI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgggtctggtactgggtgaccagctgtccttcgacctggcaagcctcaacgcc
ctcgatcctgcccgcgatgctgtgctgatggcggaagtggaaggggaggccaggtacgtg
ccgcatcatccgctgaagatcgtcctgatcttcagcgccatgcggcacttcgcactggca
ctgcgcgagcgcggttggcaggtgcattatgtgcaactcgatgatgacggcaacagcgga
accatcgttggcgagttgcggcgctggcagcaggccctgggagccacgcatattcacctg
accgagtgcggagagtggcgcctggagcaggcgttgcgcgatgccgcactgccgcttgtg
tggcatcgcgacacgcggtttctatgctctcgcgaagctttcgcgcgctgggcccgggag
cgcggccaactgcgcatggagcacttctaccgtggcatgcgcaagcgcaccggcctgctg
ctggagcctgacggcagcccggcaggtggaacctggaatctcgatggcgacaaccgcaag
gccttgcctcgccagctacgtggccccttcgccgcacatttcgcacaggacgacatcaca
gttgcagtaatagctctggtacggcaacgcttcagcgaccactacggagccatcgacggt
ttcgactacccggtgacccatgccgaggcacagcagctctggcaacactttctggatttc
ggcctggcggctttcggtgactaccaggatgcgatggccgagggcgagccgtacctgttc
catgcgcgcatcagtgcagcactcaacatcgggcttcttgatgtgcgttttctatgcgac
ggggtcgacaaggcctggcgcgaggggcgagtaccgctcaatgcagcagagggcttcatc
cgccagctgatcggctggcgtgagtatgtacgcggcatctattggctgcgcatgccggag
tatgctgcgctcaattacctgggtaacgagcgagcgttgccggaattctactggaccggt
cgcacccgcatgcgctgcatggagcaggccatcgggcagacccttcgcttgggttacgct
caccatatccagcgcctgatggtcaccggcaacttcgccttgttggccggtatcgcgccc
accgcaatctgtgagtggtacctggctgtctacatggacgccttcgactgggtcgaactg
cccaacacgcttggtatggtgatgtacgccgacggcggctacctgggctccaagccttac
tgcgccagcggtcgctacatccagcgcatgtccgatcattgcaaggcctgcagttacagg
gttgaccaggtggccgaggaggacgcctgcccgttcaatgccctgtactggcattttctc
atccgtcatcgccacctgctttcggccaacccgcgtctggcgctggtctatcgaaacctc
gatggcatgtcggctgaccgtcgcgatgccatctggcagcgtggccagtcacttttggcg
cgactcgatgcggtgcagccgatatga
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