Pseudomonas putida HB3267: B479_14050
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Entry
B479_14050 CDS
T02389
Name
(GenBank) YD repeat-containing protein
Organism
ppuh
Pseudomonas putida HB3267
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
AGA73704
LinkDB
All DBs
Position
complement(3084988..3089223)
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AA seq
1411 aa
AA seq
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MFEAARLHDEIEHTSALAGFLAGAVIGLAIATAAAFTICTAGLGGFLLGALIGIGAGMLP
MLGEKIGSMFSSPAGQIELPGCSTDVFINNRNAAHATLSTAKCDKHPAPVLVAEGSTNVF
INGVAAARKGDKLTCGAKISGGSNNVYIGGGTQRYLPVDDEVPEWLRVTVDVLMIVASMG
RSVLAVGRLGLQAGLKAAGPCALQTGATIAASYLAGRFIIGPAVGRAIEGFTGNPVDMTT
GRKLLVNETDFVLPGLMPIEWSRFYASDLTAESALGQGWILPWEQSLRRSGGFVYLTDNQ
GRSVPFVDLEPGESIYNPNERIYLVRTEGGHYLLQTLDNQFFYFGEVPDGNTHVPLQRLE
NALGHYLHFTYSAEGRLTDITAPGAVRVHLHYDNPLGRLTDVKRVVDDTAVETLVRYRYD
DNGQLTEVINRNGDSVRHFSYADHLMTRHSNALGLICEYRWESQNGKPRVVEHWTSDGEH
YHFRYDPAKRTSWATDVLGRELEIQYNEDNRVIASCDFGGERYGMDFDATGNLIGIDLPD
GNHLALKYDEFSRLIEETDPLGRKISYKYHLATPLVTETRFPDGSVWQSRYDDKGNLITE
IDPLGHKTQYFNSDDGLPHTIIDANFKSKYLWWNAYAQIERFQDCSGKSTYYRYDERQHL
IAVTDALNQTTTLERKPDGEVLRIDHPDGTAETFTYNTLGQVLTHTDGKGQTTRLQRTSR
GLPSSRQDAKGEWVRYEYDKALRLTALVNENSAAYRFAYDASDRLSEEVRVDNLTRRFSY
DAGGHLVRLDEIGYGESGERPERSTLFERDAIGRLLAKVNRDARQDFAYDDADRLLSIQR
QPTATGKQLGITDEKLCYRYDLLGRLTQELSPSGALDYEYDALSNLTTLTLPDGRKLNHL
YYGSGHLHQLNLDGQVISDMERDDLHREVYRTQGKLTSCFGYDAMGRKAWQFASTLPADK
LSQVHNTGVNTSLLVEHAYNPIHRRYQYDPAGELVRTLDKLRGEIKYEYEANGQLRSRDT
GSLVGSEEFRYDAAANRLDFNARQFAKVKDNRIKQWRDQEYRYDPWGNLIEKRSGHSKLQ
TFAYDCENRLVRAETLVNGKLESRGEYRYDSLGRRVAKQAEINGQVEQKRFLWQGLRMLR
EETPGQSILYVYEPGSYAPLARVDQTEGEEQKLYYFHTDQIGTPLELTDSDGKIVWQATY
RSWGSVEQVAVSEVDQSLRFQGQYFDSETGLHYNTYRYYAPDVGRFMSPDPIGLRGGFNL
FRYNLNPIMWIDPAGLAPCPVRVVNNTKIHGRGQVDGTPGHDQFSEAIANKLAMSGKFTD
VYLNRSYSFASGRGISARRPDVMAVDVNGKVHAIELASKTDMGKKLPTLTSRNNSAMNNL
PSSKRGEVVVLEHPYSASDMKAILDDFISGI
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggctgcgcggctgcacgacgagattgaacacaccagtgccctggcaggtttt
cttgctggcgcagtgattggcctggcaatcgctacggctgctgccttcactatctgcacc
gccggcctcggcggcttcttgctgggggcattgatcggcattggtgccggcatgctgccg
atgttgggggagaagataggctcgatgttcagttcgcccgctggacagatagagctaccc
ggttgttcgacagacgtattcatcaacaatcgcaatgcggcccacgccactttgagtacc
gccaaatgtgacaagcatccggcgccggtactggttgcagaaggctccaccaacgtattc
atcaatggcgttgcagcggcccgcaaaggtgacaagctgacgtgtggcgcaaagatttcg
ggcggttcgaacaacgtctacattggtggcggtactcagcggtacttgcccgtcgatgat
gaggtaccggaatggctgcgcgtcacggtcgatgtgttgatgatcgttgcctcgatgggg
cgatcggtactggcagtcggtcgcctggggcttcaggccggcctcaaggccgctggcccg
tgtgcacttcagactggcgctaccattgcagcaagctacctcgccgggcgcttcatcatc
ggcccggctgtagggcgagcgatcgaaggctttaccggtaacccggtggacatgaccacc
ggccgcaagctgctggtcaatgaaacagactttgtactgcctggcctgatgccaatcgag
tggtcgcgtttttatgccagcgaccttaccgccgaaagtgctctcggccagggctggata
ctgccttgggagcaaagcctgcgtcgtagtggtgggttcgtctatctgactgacaaccag
ggccgaagcgtcccattcgtcgatctggagcctggcgaaagtatctacaaccccaacgag
cgtatctacctcgtgcgtaccgagggcggccactaccttctgcaaacgctcgacaaccag
ttcttctactttggtgaagtgccggatggcaatacccatgtgcctttgcagcgtctggaa
aatgcgctgggccattacctgcactttacctacagtgccgaagggcggctcacggacatc
accgcgccaggagccgtgcgtgtccacctgcactatgacaacccgctcgggcgtttgacg
gacgtcaagcgcgtggtcgatgacaccgctgtcgaaacgctggtgcgttaccgctatgac
gataacggccagctcactgaagtgatcaaccgcaatggcgattctgttcgtcatttcagc
tacgcagatcacctaatgacccggcacagcaatgccttgggcctgatctgcgagtaccgt
tgggaatcccagaatggcaagccgcgcgtggtcgagcactggaccagcgacggcgagcat
taccacttccgttacgaccctgccaaacgcaccagttgggcaaccgacgtgctgggccgt
gaactggagatccagtacaacgaggacaaccgcgtcatcgccagctgcgacttcggtggt
gagcgctacggtatggatttcgacgccactggaaatctgatcggcatcgatcttcccgat
ggcaatcacttggcgctcaagtacgacgaattctcccggctgatcgaggaaaccgaccca
ctgggccgcaagatcagctacaagtatcacctcgccacgccactggtcaccgaaacccgc
ttccccgacggcagcgtctggcagtctcgttacgacgacaaaggcaacctgatcaccgag
atcgacccgctgggccacaagacccagtacttcaacagtgacgatggcctgccgcacacg
atcatcgatgccaactttaagtccaagtatctgtggtggaatgcctatgcccagatcgaa
cgtttccaggactgctccggcaaaagcacttactaccgttatgacgagcgtcagcacctc
attgcagtgaccgatgcactgaaccagaccaccacgctggaacgtaaaccggatggcgaa
gtgctacgcatcgaccacccggacggcactgcggagacctttacttacaataccctcggc
caggtgttgacccacaccgatggcaaaggccagaccacacgcctgcaacgcacttcacgt
ggcctgccgagcagccgtcaggatgccaagggcgagtgggttcgctatgaatacgacaag
gcgctgcgtctgactgcactggtcaacgaaaacagcgcggcgtaccgcttcgcctacgac
gcatcggaccgcttgagcgaagaagtgcgggtcgacaatttgacccgacgcttcagctac
gacgcgggcgggcatctggtccggctggacgaaatcggctacggcgaaagcggtgagcgc
cccgagcgcagcacgctgttcgagcgcgacgcaattggccgtttactggccaaggtcaac
cgcgatgcgcggcaagacttcgcctacgacgatgctgaccgcttgctgagcattcagcgc
cagccgacagctactggcaaacagttgggcatcaccgatgaaaagctctgctacagatat
gacctgctggggcgactgacacaggaactgagcccgagcggcgcgctggactatgagtac
gatgctctcagcaacctgaccacactgaccctgccggatggccgcaagctcaaccacctg
tactacggcagcggccatttgcaccagttgaacctggacggccaggtgatcagcgacatg
gagcgtgacgacctgcaccgtgaggtctaccgcacccagggcaagctcaccagttgtttt
ggctacgacgccatggggcgcaaggcctggcagtttgcctcgaccttacccgccgacaag
ctctcgcaggtgcacaacactggcgtgaatacatcgctgctggtggaacatgcctacaac
ccgattcaccgacgctaccaatacgacccggcgggtgaactggtacgcacgctggacaag
ctgcgtggtgagatcaagtatgagtacgaagccaacggccaattgcgcagccgtgatacc
ggctcgctggtaggtagcgaagaattccgctacgacgcggcggccaaccggctggacttc
aatgcgcggcagtttgccaaggtcaaggacaatcggatcaagcagtggcgggaccaggag
taccgctacgatccgtggggcaacctgattgagaaacgctcggggcacagcaagctgcag
acctttgcttatgactgcgagaaccgcctggtacgggccgagacactggtcaatggcaag
ctggaaagccggggtgagtatcgctacgacagcctggggcggcgggtggccaagcaggcg
gagatcaatggccaggtcgaacagaagcgcttcctttggcaagggctgaggatgctgcgg
gaagagacgcctgggcagagcatcttgtatgtgtatgagccgggtagctatgcgccgttg
gcacgggttgaccagacagagggagaagagcagaaactctactacttccatacggatcag
attggtacgccgctagagctgacggacagtgatgggaagatcgtttggcaggcgacgtat
cgttcgtggggatctgtagagcaggtagccgttagtgaagtcgatcagagtttacgcttt
caggggcaatatttcgattctgaaacagggcttcattataatacataccgttattatgcg
cctgatgttggtcgctttatgtcgcccgatccgatagggcttcgaggtggatttaaccta
tttaggtataatctcaatccgattatgtggattgatcctgccggcctcgcgccatgcccg
gtacgggtggttaataacacaaaaattcatgggcgtggtcaagtagatggcacaccgggt
catgatcagttttctgaagcaattgcaaataagctggcaatgagtggaaaatttacagat
gtttacctaaataggtcttatagtttcgctagcggtcgcggcatttctgcaagaaggccc
gatgttatggctgttgatgtcaatggcaaggttcacgcgatagagttggcatcgaagacg
gacatggggaaaaaactacccaccctgacctctcgaaataattctgccatgaacaatcta
ccgagcagtaaacgaggggaggttgtggttcttgaacacccgtatagtgcatctgacatg
aaagctatactggacgattttatttcgggtatatag
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