Pseudomonas putida HB3267: B479_15280
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Entry
B479_15280 CDS
T02389
Name
(GenBank) ECF subfamily RNA polymerase sigma-24 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B479_15280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppuh03021
]
B479_15280
Transcription machinery [BR:
ppuh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B479_15280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
AGA73950
LinkDB
All DBs
Position
complement(3385946..3386458)
Genome browser
AA seq
170 aa
AA seq
DB search
MIDAAPPPEHSLPALYREHRGWLETWLRRRMGNAWDAADLSQDTFLRILASAQPLADIRE
PRAYLLTVGKRLLSNFHQRRSLEQAYLDALAQLPEQHVPSPEQRWVLLETLQALDELLDG
LKVPVRKAFLWSQLEGLGYAEIGKRLGVCERSVKRYMAQAYEHCLLAELQ
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgccgcgccgccaccggagcatagcctgcctgccctgtaccgggaacaccgc
ggctggctggaaacctggctgcggcggcgcatgggcaatgcctgggatgccgccgacctc
agccaggataccttcctgcgtatcctggccagcgcccagccgctggcagacattcgcgaa
ccgcgtgcctacctgctgaccgtgggcaagcgcctgctgagcaacttccaccagcggcgt
agcctggaacaagcctacctcgatgcactggcgcagttgcccgagcagcatgtgccctcg
ccagagcagcgttgggtactgctggaaaccctgcaagccctcgacgagttgctcgacggc
ctcaaggtgccggtacgcaaggcctttctctggagccagctggagggcctgggctatgcc
gagatcggcaagcgcctgggcgtttgcgagcgctcggtcaaacgctacatggcgcaggcc
tacgagcattgcctgctggccgaactgcaatga
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