Pseudomonas putida HB3267: B479_15615
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Entry
B479_15615 CDS
T02389
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppuh03000
]
B479_15615
Transcription factors [BR:
ppuh03000
]
Prokaryotic type
Helix-turn-helix
GntR family
B479_15615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
MarR_2
HTH_24
HTH_IclR
HTH_Crp_2
TrmB
Fe_dep_repress
HTH_CodY
HTH_11
GMT-wHTH
HVO_A0261_N
HTH_36
HTH_27
HTH_5
HTH_41
SepF
Ribosomal_S25
MarR
HTH_28
HTH_23
HTH_29
HTH_20
EAP30
Motif
Other DBs
NCBI-ProteinID:
AGA74017
LinkDB
All DBs
Position
3460536..3461282
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AA seq
248 aa
AA seq
DB search
MKRQPLDDSFKVNRNPVTLREIVLDKLRAAIMNFHLLPGDRLVERDLCDRLGVSRTSVRE
ALRHLESEGLVEFADAKGPRVAIITLEDARDIYELRCVLEGLIVQLFTLNAKAKDIRALE
RALEVNREALEEGELQQVLDSVQGFYDVLLEGSGNQVAAQQLRQLQARISYLRATSVSQE
NRRGASNREMEKIVEAIKSGDPLVAHQASVDHVRAAAKVALDYLRQKQDDNVKVREMVEP
LALKDPRI
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgccagccactcgacgacagcttcaaggtcaatcgcaaccccgttaccctgcgc
gaaatcgtgctcgacaagctgcgcgccgcgatcatgaacttccacctgctgccaggcgat
cgcctggtcgagcgcgacctctgcgaccgcctcggcgtcagccgcacctcggtgcgtgaa
gccctgcgccacctggaatccgaaggcctggtggagttcgccgacgccaagggcccgcgc
gtggccatcatcaccctggaagacgcccgcgacatctacgagctgcgctgcgtgctcgaa
ggcctgatcgtgcagctgttcaccctgaacgcaaaggccaaggacatccgcgccttggaa
cgcgcgctggaggtcaaccgcgaagccctcgaggaaggcgaactgcaacaggtgctggac
tcggtacaaggtttctacgatgtgctgctggaaggctccggcaaccaggtggccgcccag
cagctgcgccagttgcaggcgcgcatcagctacctgcgcgccacctcagtgtcgcaggag
aaccgccgcggcgccagcaaccgcgaaatggaaaagatcgtcgaggcgatcaagagcggc
gacccgctggttgcccaccaggcctcggtcgaccacgtccgcgccgccgccaaggtggcc
ctggactacctgcgccagaagcaggatgacaacgtcaaggtgcgcgagatggtcgagccc
ctggccttgaaggacccacgcatataa
DBGET
integrated database retrieval system
