Pseudomonas putida HB3267: B479_16390
Help
Entry
B479_16390 CDS
T02389
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppuh03016
]
B479_16390
Enzymes [BR:
ppuh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
B479_16390
Transfer RNA biogenesis [BR:
ppuh03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
B479_16390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Acb1
Motif
Other DBs
NCBI-ProteinID:
AGA74170
LinkDB
All DBs
Position
complement(3621952..3622497)
Genome browser
AA seq
181 aa
AA seq
DB search
MTPVSGRIEKPFKRLFFALPVSDAQRRALAQWRRGLNLRSGKPVPAANFHVTLLFLGDVD
TAHVPAICAVVDQLALPATAPRLLLDRLQVWQRASALVLEAQQTPPALLQLVYSLQQALL
PLGVEAADREYRPHLTLARDYRGQPPEASSAPDFYLAARHFTLYESRKGAYWPLAQWPLS
G
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacaccggtcagcggacgtatcgaaaaaccattcaagcgcctgttcttcgccttgccg
gtcagcgatgcccagcgccgcgccctggcccagtggcgacgtggcctgaacctgcgcagc
ggcaagccggtgccggccgccaacttccatgtgacactgctgtttctcggcgatgtggat
accgcccatgtgcctgctatttgcgcggtggtcgaccagctggcgctaccggccacggca
ccacggttgttgctggaccgcctgcaggtgtggcagcgggccagtgcactggtgctggag
gcgcagcagaccccaccggccctgttgcaactggtgtacagcttgcagcaggcgctgctg
ccgttgggggtggaagcggccgaccgcgagtatcgcccgcacctgacgctggccagggat
taccgcggccagccgccagaggccagcagcgcgccggatttctacctcgccgcccgccat
ttcacactgtacgagtcgcgcaagggcgcttactggccattggcgcaatggccgctttca
ggctga
DBGET
integrated database retrieval system
