Pseudomonas putida HB3267: B479_16495
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Entry
B479_16495 CDS
T02389
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppuh03032
]
B479_16495
03400 DNA repair and recombination proteins [BR:
ppuh03400
]
B479_16495
Enzymes [BR:
ppuh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B479_16495
DNA replication proteins [BR:
ppuh03032
]
Prokaryotic type
DNA Topoisomerases
B479_16495
DNA repair and recombination proteins [BR:
ppuh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B479_16495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
AGA74191
LinkDB
All DBs
Position
3639702..3640724
Genome browser
AA seq
340 aa
AA seq
DB search
MLDCPLPRTLHYVDDSQPGLTRRRWRERFIYLDADGQRVRDSDTLARIAALAIPPAYTEV
WICADPQGHLQATGRDARGRKQYRYHAQWREIRDQHKYGRMLAFAQALPKLRAQLHDHLA
RPGLDREKVMALVISLLDHTLIRIGNQRYLRDNQSYGLTTLRNRHVEVKGSSIRFQFRGK
RGVEHNVSLNDRRLANLLKRCMELPGQALFQYLDDDGQRHSVGSSEVNQFLQQLTGADFT
AKDYRTWAGSSLALDLLRPLAWEPESEAKRQVAAIVRQVASRLGNTPAVCRRCYIHPAVL
EHYALGRLANLPKNRVRKGLDREEVALLLFLQALEEQDDH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttgactgccccctgccgcgcaccctgcactacgtcgacgacagccagccgggcctg
acccggcggcgctggagagagcgcttcatctacctggatgccgacggccaacgagtgcgc
gacagcgatacccttgcccgcatcgctgcactggcaatcccaccggcctataccgaggtg
tggatctgcgccgacccgcaaggccacctgcaagccacaggtcgcgatgcccgtggccgc
aagcaataccgctaccacgcgcagtggcgcgaaatacgcgaccagcacaagtacgggcgc
atgctggcgtttgcccaggccctgccgaaattgcgcgcacagctgcacgaccaccttgcc
cggccaggcctggaccgggaaaaggtgatggcgctggtgatcagcctgctggaccacacc
ctgatccgcatcggcaaccagcgctacctgcgtgacaaccagtcctatggactgaccacc
ctgcgcaaccgccatgtcgaggtgaagggcagcagcatccgcttccagttccgcggcaag
cgcggcgtcgagcacaacgtcagcctcaacgatcggcgcctggccaacctgctcaagcgc
tgcatggaactgcccggccaagcgttgttccagtacctggacgacgacggccagcgccat
agcgtcggctccagcgaggtcaaccagtttctgcagcagctgaccggtgccgacttcacc
gccaaggactaccgcacctgggccggtagcagcctcgccctggacctgctgaggcccttg
gcctgggagcccgagagcgaagccaagcgccaggtcgccgccatcgtccgtcaggtagca
tcacgcctgggcaatacaccggcagtgtgcaggcgctgttacattcacccggctgtactt
gaacactatgccctggggcgcctggccaacttgccgaagaaccgtgtgcgcaaaggcctg
gaccgtgaagaagtagccttgctgttatttcttcaggcactcgaggaacaggatgaccat
taa
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