Pseudomonas putida HB3267: B479_18725
Help
Entry
B479_18725 CDS
T02389
Name
(GenBank) sigma-54 dependent transcription regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh02020
Two-component system
ppuh02025
Biofilm formation - Pseudomonas aeruginosa
ppuh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B479_18725
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
B479_18725
09142 Cell motility
02040 Flagellar assembly
B479_18725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppuh03000
]
B479_18725
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppuh02035
]
B479_18725
Transcription factors [BR:
ppuh03000
]
Prokaryotic type
Helix-turn-helix
Other families
B479_18725
Bacterial motility proteins [BR:
ppuh02035
]
Flagellar system
Flagellar assembly proteins
Others
B479_18725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_22
AAA_7
nSTAND3
AAA
bpMoxR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AGA74637
LinkDB
All DBs
Position
complement(4126055..4127530)
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSARRRDLAVVLNFLGEENLACSSQDWQQVVEPLSSSREVLCVLIGTV
NAPGSVLGLVKTVTGWDEFLPVLLLGEISSAEFPEDLRRRVLSNLEMPPSYSQLLDSLHR
AQVYREMYDQARERGRQREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSIDVRIIAATHKNLETMIEEGTFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSASIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVSELPKKFRYVDDEDEQMVDSLRSDLEERVAINGHTPN
FSNHAMLPPEGLDLKDYLGSLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRQGGEEQAED
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaagattctgctgatcgacgacgacagcgcacgccgccgcgacctg
gcggtggtgcttaacttcctcggcgaagaaaacctcgcttgctccagccaggactggcag
caagtggtcgagccgttgtcttcgagtcgcgaagtgctgtgcgtgcttattggcactgta
aatgccccgggcagtgtgcttgggctcgttaagacagtgactgggtgggatgagttcctt
ccggttctgcttttaggtgaaatttcttctgcggagttcccggaagaccttcgccgccgg
gtgctttccaacctggaaatgccgccaagctacagccagctgctggattcgctgcaccgt
gcccaggtctatcgcgagatgtacgaccaggcgcgcgagcgtggtcgccagcgcgaaccc
aacctgttccgcagcctggtcggcaccagccgtgccattcagcacgtgcggcagatgatg
cagcaagtggccgataccgatgccagcgtgctgatcctgggtgagtccggcaccggcaag
gaagtggtcgcgcgcaacctgcactaccattccaaacgccgcgaggcgccgttcgtgccg
gtcaactgcggcgcgatcccggccgagttgctggaaagcgaactgttcggccacgagaag
ggcgcctttaccggggcgatcaccagccgtgccgggcgcttcgagctggccaacggcggt
accctgttcctcgacgaaatcggcgacatgccgttgccgatgcaggtcaagctgttgcgc
gtgctgcaggagcgtaccttcgagcgcgtgggcagcaacaagacccagagcatcgatgtg
cgcatcattgccgcgacccacaagaacctcgagaccatgatcgaggagggcacgttccgc
gaagacctgtactaccgcctgaacgtgttccctatcgagatggcgccgctgcgtgagcgg
gtggaagacatcccgctgctgatgaacgagctgatctcgcgtatggagcacgagaagcgc
gggtccatccgcttcaactccgcgtcgatcatgtcgctgtgtcgccacggctggccgggt
aacgtgcgcgagctggccaacctggtcgagcgtatggcgatcatgcacccgtacggggtg
attggcgtttccgagctgccgaagaaattccgttacgtcgatgacgaagacgagcagatg
gtcgacagcctgcgcagcgacctggaagagcgcgtggcgatcaatggccatacgccgaac
ttcagcaaccacgccatgctgccacctgaaggcctggacctgaaggactatctgggcagc
ctggagcagggcctgatccagcaagcgctggacgatgccaacggtatcgttgcgcgtgcg
gctgaacgtttgcgcattcgccgcaccaccttggtcgagaagatgcgcaagtatggcatg
agtcgccagggcggcgaggaacaggcggaggattga
DBGET
integrated database retrieval system
