Pseudomonas putida HB3267: B479_19095
Help
Entry
B479_19095 CDS
T02389
Name
(GenBank) RNA-binding S4 domain-containing protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppuh03009
]
B479_19095
Enzymes [BR:
ppuh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
B479_19095
Ribosome biogenesis [BR:
ppuh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B479_19095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AGA74711
LinkDB
All DBs
Position
complement(4212389..4213456)
Genome browser
AA seq
355 aa
AA seq
DB search
MSEQDLQDTEITPPSGEKLQKVLARIGVGSRRDVEAWISQGRIKVNGVEATLGQRVDLHD
AIAVDGKLIKREEAAEATRRVIMYNKPDGEICTRDDPEGRPTVFDRLPRPKEGRWINIGR
LDINTTGLLLFTTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLEDGPAK
FTDIQKAPGGEGFNHWYHCVVMEGRNREVRRLWESQGMVVSRLKRVRFGPVFLNSDLPMG
RWREMTQGEIDILAAEVGLQPVALPAMKLKAKDKMERLQRKSTRPLGRGERVRSLRPAHE
GAAAGERPARQAREEAPRKTGRGSTVAERPSEMRKRPAKPEGDKPAGRGRGKPRG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcaagacctgcaagataccgagatcacccctccatccggcgaaaagctgcag
aaagtgctggcgcgcattggcgttggctcgcgccgtgacgtcgaggcctggatcagccag
ggccgcatcaaggtcaacggcgtcgaggccaccctcggccagcgcgtcgacctgcacgac
gccattgccgtggatggcaagctgatcaagcgcgaagaggccgccgaggccacccgccgg
gtgatcatgtacaacaagcccgatggcgaaatctgcacccgtgacgacccggagggccgc
ccgactgtgttcgaccgcctgccacgtccgaaagaaggccgctggatcaacatcggccgc
ctcgatatcaacaccaccggcctgctgctgttcaccaccgacggtgaactggccaaccgc
ctgatgcacccgtcctacgagatggaccgtgagtacgcggtacgtgtgcgtggtgaggtc
gacgacgagatgatcgagcgcctgaaggccggcgtgatgctggaagatggcccggccaag
ttcaccgacatccagaaggcacccggtggcgaaggcttcaaccactggtaccactgcgtg
gtgatggaaggccgtaaccgtgaagtgcgtcgcctgtgggagtcccagggcatggtggtc
agccgcctgaagcgcgtgcgtttcggcccggtgttcctcaactccgacctgccgatgggc
cgctggcgtgaaatgacccagggcgaaatcgacatcctcgctgctgaagtgggcctgcag
ccggtggcgctgccagccatgaagctcaaggccaaggacaagatggagcgcctgcagcgc
aaatcgacccgcccgctgggccgtggcgagcgcgtgcgcagcctgcgcccggcccacgaa
ggtgctgctgccggcgaacgcccggcgcgccaggcgcgtgaagaggccccgcgcaagacc
ggccgtggcagcaccgtggccgaacgcccgagcgagatgcgcaagcgtccggccaagcct
gaaggtgacaagccggcagggcgtggccgcggcaaaccgcgtggctga
DBGET
integrated database retrieval system
