Pseudomonas putida HB3267: B479_22560
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Entry
B479_22560 CDS
T02389
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh00362
Benzoate degradation
ppuh01100
Metabolic pathways
ppuh01120
Microbial metabolism in diverse environments
ppuh01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
B479_22560
00624 Polycyclic aromatic hydrocarbon degradation
B479_22560
Enzymes [BR:
ppuh01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
B479_22560
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GFIT
Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
Motif
Other DBs
NCBI-ProteinID:
AGA75401
LinkDB
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Position
complement(4963556..4964275)
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AA seq
239 aa
AA seq
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MPAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIPQSISETTGPDFSHLGFGAH
DHDLLLNFNNGGLPIGERIIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPL
DPNFGGVGRCLTDRDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFAISGPSIATKLITQLY
FEGDPLIPMCPIVKSIANPQAVQQLIAKLDMSNANPMDCLAYRFDIVLRGQRKTHFENC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccaggacaacagccgcttcgtgatccgtgatcgcaactggcacccgaaagct
cttacgcctgactacaagacgtccattgcccgttcgccacgccaggcactggtcagcatc
ccgcagtcgatcagcgaaactaccggcccggacttttcccacctgggcttcggcgcccat
gaccatgacctgctgctgaacttcaacaacggcggcttgccgatcggcgagcgcatcatc
gttgccggccgtgtcgtcgaccagtacggcaagcctgtgccgaacaccctggtggaaatg
tggcaagccaacgccggcggccgctaccgtcacaagaacgaccgctacctggcgccgctg
gacccgaacttcggtggcgtcggccgctgcctgaccgaccgtgatggctactacagcttc
cgcaccatcaagccgggcccgtacccatggcgcaacggcccgaacgactggcgcccggcg
cacatccacttcgccatcagcggcccgtcgatcgccaccaagctgattacccagctgtac
ttcgagggtgacccgctgatcccgatgtgcccgatcgtcaagtcgatcgccaacccgcaa
gccgtgcagcagttgatcgccaagctcgacatgagcaacgccaacccgatggactgcctg
gcctaccgcttcgacatcgtgctgcgcggccagcgcaagacccacttcgaaaactgctga
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